Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0640
         (580 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70780-5|CAD91633.1|  779|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z70780-3|CAA94828.2|  828|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z81115-4|CAB03294.2|  651|Caenorhabditis elegans Hypothetical pr...    29   1.8  
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    29   3.2  
AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical...    29   3.2  
AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical ...    28   5.5  
AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical ...    28   5.5  
AF016654-8|AAB66025.2|  331|Caenorhabditis elegans Hypothetical ...    27   7.3  

>Z70780-5|CAD91633.1|  779|Caenorhabditis elegans Hypothetical
           protein F46B6.5c protein.
          Length = 779

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 259 SRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNSERHRELR 390
           S ++ SSP +S P  ++K     +K   +   KRT+ +R RE R
Sbjct: 442 SLRYGSSPQQSRPVEEQKRHRDTEKERERDHEKRTDRDRDREKR 485


>Z70780-3|CAA94828.2|  828|Caenorhabditis elegans Hypothetical
           protein F46B6.5a protein.
          Length = 828

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 259 SRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNSERHRELR 390
           S ++ SSP +S P  ++K     +K   +   KRT+ +R RE R
Sbjct: 442 SLRYGSSPQQSRPVEEQKRHRDTEKERERDHEKRTDRDRDREKR 485


>Z81115-4|CAB03294.2|  651|Caenorhabditis elegans Hypothetical
           protein T05D4.4 protein.
          Length = 651

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -1

Query: 157 TSWLLKPFELXLQVCGDPWGGLSGRECHSRSR 62
           TSW   PF   + V   P    SGR  HSR R
Sbjct: 149 TSWPTDPFAKEITVASRPLPSTSGRTSHSRRR 180


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +1

Query: 160 PGRSTTNEKECGFGLLKDGCQLRKTPESLYSTVSRKFDSSPAES-TPRLQEKNPLSGQKT 336
           P RS +N  E      KD  + +   +  + + SRK  S  +ES   R + +     +K 
Sbjct: 399 PSRSRSNSNERNLKEKKDRKKKKSEKKRKHHSKSRKHRSKRSESREERHRRRKEKKREKK 458

Query: 337 LSKRRRKRTNSE 372
             +RRR  T S+
Sbjct: 459 KKRRRRSSTTSD 470


>AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.10 protein.
          Length = 986

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 238 ESLYSTVSRK-FDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNS 369
           +S Y  + RK F+S+P    P+LQ+  P   + T   R  K  +S
Sbjct: 851 DSDYKPIVRKEFESAPIHLPPKLQKSLPFKMKPTYQAREEKEKDS 895


>AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical
            protein ZK484.4a protein.
          Length = 919

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 190  CGFGLLKDGCQLRKTPESLYSTVSRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNS 369
            CG    +    L + PE+   ++ +K+  S   S  R++  +  S     +KRRR   +S
Sbjct: 824  CGKPRTRQFQSLIQKPEAYMESLKQKYIESRVSSAKRMRSNDGASTSSRPAKRRRSNASS 883

Query: 370  ER 375
             +
Sbjct: 884  PK 885


>AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical
           protein ZK484.4b protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 190 CGFGLLKDGCQLRKTPESLYSTVSRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNS 369
           CG    +    L + PE+   ++ +K+  S   S  R++  +  S     +KRRR   +S
Sbjct: 778 CGKPRTRQFQSLIQKPEAYMESLKQKYIESRVSSAKRMRSNDGASTSSRPAKRRRSNASS 837

Query: 370 ER 375
            +
Sbjct: 838 PK 839


>AF016654-8|AAB66025.2|  331|Caenorhabditis elegans Hypothetical
           protein C17A2.1 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -3

Query: 215 PSFSRPKPHSFSXVVDLPGDQLV 147
           P+F+R   H FS V++LP ++++
Sbjct: 104 PNFTRENSHKFSEVLNLPNNEIL 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,234,423
Number of Sequences: 27780
Number of extensions: 234961
Number of successful extensions: 651
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)