Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0639
         (845 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5GA15 Cluster: Putative uncharacterized protein precur...    35   2.2  
UniRef50_Q0U0H1 Cluster: Predicted protein; n=1; Phaeosphaeria n...    34   3.9  
UniRef50_A5ZEK4 Cluster: Putative uncharacterized protein; n=2; ...    33   6.8  
UniRef50_Q0AC39 Cluster: TonB family protein; n=1; Alkalilimnico...    33   9.0  
UniRef50_O67321 Cluster: Adenylosuccinate synthetase; n=3; Bacte...    33   9.0  

>UniRef50_A5GA15 Cluster: Putative uncharacterized protein
           precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
           Putative uncharacterized protein precursor - Geobacter
           uraniumreducens Rf4
          Length = 181

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +1

Query: 175 SKQQAKDISMY**RRTNKGSI-YTHGPRDSKMDSRDLCAMMVFD--NDRHYQGQDA*TQE 345
           +KQ+ +DI     R  N  S+ + H     K ++  +C   +FD  N RHY        E
Sbjct: 21  AKQETRDIQF---RFKNADSVVFNHDVHLKKYNNCKICHDAIFDLKNPRHYT-----MDE 72

Query: 346 REQGDSCGACHVKI 387
            E+  SCGACH  +
Sbjct: 73  MEKNRSCGACHAGV 86


>UniRef50_Q0U0H1 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 198

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
 Frame = +2

Query: 533 YRTSRGCTSILRCISSSEERASVTFAVLSA-----------STCLVS*DCH*SHSQNAMR 679
           Y +  G  ++ + + + E+   V +A++SA           +TC+V  D     S  A+R
Sbjct: 114 YASREGLHTVCKVVETIEQPVEVVWALVSAFGAIKAWMPAIATCIVLKDRPQPPSYGAVR 173

Query: 680 IVSVQGXELEGIXSLWE-KNDATSY 751
           + +  G ELE I  +W+ KN   SY
Sbjct: 174 LANASGSELEEILEIWDAKNHFISY 198


>UniRef50_A5ZEK4 Cluster: Putative uncharacterized protein; n=2;
            Bacteroides|Rep: Putative uncharacterized protein -
            Bacteroides caccae ATCC 43185
          Length = 1146

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 483  PGHKRSRRFVIGMPTCSIEQAEAVRQYYAAFPALKKGQVSPLQYY 617
            P ++R R     +P C  E+A     Y  A P +K+G++  ++Y+
Sbjct: 1080 PDYERVRTCSPNIPKCMYERAAETNMYIVAAPPMKQGRIELIRYF 1124


>UniRef50_Q0AC39 Cluster: TonB family protein; n=1; Alkalilimnicola
           ehrlichei MLHE-1|Rep: TonB family protein -
           Alkalilimnicola ehrlichei (strain MLHE-1)
          Length = 333

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 228 FVCPSLLIHAYIFGLLFASVSILDMMHRLTLNIFAIALSLASNE*ILRAPL 76
           +V  S+L+H  IFGL FA+VS+L            I  + A +E +  AP+
Sbjct: 21  YVAASILLHVLIFGLFFANVSLLPQATEEHAGDGEIIEAFAVDEEVAMAPI 71


>UniRef50_O67321 Cluster: Adenylosuccinate synthetase; n=3;
           Bacteria|Rep: Adenylosuccinate synthetase - Aquifex
           aeolicus
          Length = 432

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 346 REQGDSCGACHVKITSTHSTLHHLIPTVCIQEHNLGNIVDQLCTSLQDIKDHEDLS*VCQ 525
           R QG S  A H  + ++   + HL+PT  + EH  G I   +   L+ +  H+++  + +
Sbjct: 32  RYQGGS-NAGHTVVVNSQKFILHLLPTGILHEHVKGVIAQGMVVDLEVL--HKEVKNLEE 88

Query: 526 RVL*NKQRLYVNITLH 573
           + +  K+RL+++   H
Sbjct: 89  KGIYVKERLFISDRAH 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,863,788
Number of Sequences: 1657284
Number of extensions: 16155776
Number of successful extensions: 32465
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32462
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)