Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0639
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1054 + 34133087-34133417,34133546-34133862,34133988-34134158     32   0.66 
08_01_0648 + 5602454-5602513,5602913-5603000,5603128-5604248,560...    30   2.0  
03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648     29   4.7  
09_01_0056 + 914117-914464                                             28   8.1  
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058           28   8.1  
08_01_0649 + 5607234-5608397,5609358-5609513,5609598-5609796,561...    28   8.1  
03_02_0858 + 11848128-11848287,11848906-11848973,11849281-118494...    28   8.1  

>01_06_1054 + 34133087-34133417,34133546-34133862,34133988-34134158
          Length = 272

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 576 PALKKGQVSPLQYYLPPPAWCRKTVTEVTAKMQCELSPSKXW 701
           PAL+ G V P ++ L PP W +  V  + +   C+   ++ W
Sbjct: 106 PALRAGNVQPYEFIL-PPTWKQTRVANILSGNYCQPKCAEPW 146


>08_01_0648 +
           5602454-5602513,5602913-5603000,5603128-5604248,
           5605146-5605217,5605218-5605373,5605458-5605748
          Length = 595

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 97  IDPSCTPYFCNNLNDVRISCYISIHTPHMKK 5
           IDPS   + CNNL  V+I+C       HM K
Sbjct: 507 IDPSGGSFACNNLRKVKITCCKDDEMVHMLK 537


>03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648
          Length = 587

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +3

Query: 375 PRQDHFNTLHTSSSDTYSLHSGTQFRKHC*SAVY*SPGHKRSRRFVIGMP--TCSIEQAE 548
           P+QD F+  HTS+  T   H+  QFR    +A+   P   R+       P   CS++Q E
Sbjct: 282 PKQDLFDPPHTSAIVTKLAHT-DQFRCLDKAAIVSGPDDVRAGGAAPSNPWRLCSVQQVE 340

Query: 549 AVRQYYAAFPALKKG 593
            V+      P    G
Sbjct: 341 EVKCLIRIVPVWSTG 355


>09_01_0056 + 914117-914464
          Length = 115

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 483 PGHKRSRRFVIGMPTCSIEQAEA 551
           P H++ RR+ IGM T ++E A A
Sbjct: 83  PAHRKQRRWGIGMATVAVESAVA 105


>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
          Length = 484

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 97  IDPSCTPYFCNNLNDVRISC 38
           IDPS   + CNNL  V+I+C
Sbjct: 412 IDPSGGSFACNNLKKVKITC 431


>08_01_0649 +
           5607234-5608397,5609358-5609513,5609598-5609796,
           5612419-5613608,5614505-5614660,5614742-5615041
          Length = 1054

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 97  IDPSCTPYFCNNLNDVRISC 38
           IDPS   + CNNL  V+I+C
Sbjct: 448 IDPSGGSFSCNNLEKVKITC 467


>03_02_0858 +
           11848128-11848287,11848906-11848973,11849281-11849403,
           11850796-11851128,11851199-11851321,11851414-11851632
          Length = 341

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 688 GDNSHCILAVTSVTVLRHQAGGGR 617
           G+  HCI  V+ V+++   AGGGR
Sbjct: 293 GEGFHCIRTVSDVSLVLDAAGGGR 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,512,357
Number of Sequences: 37544
Number of extensions: 455827
Number of successful extensions: 877
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)