BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0639
(845 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011122-1|AAR82789.1| 201|Drosophila melanogaster LD11394p pro... 31 2.6
AE014298-2000|AAF48343.1| 186|Drosophila melanogaster CG1368-PA... 31 2.6
BT004837-1|AAO45193.1| 560|Drosophila melanogaster RH47711p pro... 30 4.6
AE014298-2178|AAF48477.1| 560|Drosophila melanogaster CG9215-PA... 30 4.6
AY118284-1|AAM48313.1| 630|Drosophila melanogaster AT15314p pro... 29 6.1
AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA... 29 6.1
>BT011122-1|AAR82789.1| 201|Drosophila melanogaster LD11394p
protein.
Length = 201
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 543 AEAVRQYYAAFPALKKGQVSPLQYYLPP 626
A AV+Q YAA PA+++ V+P YLPP
Sbjct: 56 APAVQQTYAA-PAIQQSYVAPSNEYLPP 82
>AE014298-2000|AAF48343.1| 186|Drosophila melanogaster CG1368-PA
protein.
Length = 186
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 543 AEAVRQYYAAFPALKKGQVSPLQYYLPP 626
A AV+Q YAA PA+++ V+P YLPP
Sbjct: 41 APAVQQTYAA-PAIQQSYVAPSNEYLPP 67
>BT004837-1|AAO45193.1| 560|Drosophila melanogaster RH47711p
protein.
Length = 560
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 494 KITKICHRYANVFYRTSRGCTSILRCISSSEERASVTFAVLSAS 625
KI K CH +V YR CT++ + S+ R++ T AV +A+
Sbjct: 66 KICKQCHLELSVSYRFHEKCTAVQKLFRSA-SRSTSTSAVFAAA 108
>AE014298-2178|AAF48477.1| 560|Drosophila melanogaster CG9215-PA
protein.
Length = 560
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 494 KITKICHRYANVFYRTSRGCTSILRCISSSEERASVTFAVLSAS 625
KI K CH +V YR CT++ + S+ R++ T AV +A+
Sbjct: 66 KICKQCHLELSVSYRFHEKCTAVQKLFRSA-SRSTSTSAVFAAA 108
>AY118284-1|AAM48313.1| 630|Drosophila melanogaster AT15314p
protein.
Length = 630
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 379 VKITSTHSTLHHLIPTVCIQE--HNLGNIVDQLCTSLQDIKDHEDLS*VCQRVL*NKQRL 552
V + +TH HL+P+ + HNL ++V+QLC + H+ L + QR L + L
Sbjct: 514 VSLAATHP---HLLPSDIQSDIKHNLDSLVNQLCNTRLGTNQHQRLLLLRQRQLIEEDEL 570
>AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA
protein.
Length = 2352
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 379 VKITSTHSTLHHLIPTVCIQE--HNLGNIVDQLCTSLQDIKDHEDLS*VCQRVL*NKQRL 552
V + +TH HL+P+ + HNL ++V+QLC + H+ L + QR L + L
Sbjct: 2236 VSLAATHP---HLLPSDIQSDIKHNLDSLVNQLCNTRLGTNQHQRLLLLRQRQLIEEDEL 2292
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,959,443
Number of Sequences: 53049
Number of extensions: 798368
Number of successful extensions: 1417
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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