Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0639
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      28   7.3  
Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z54327-8|CAA91121.2|  451|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -2

Query: 523 GIPMTN-LRDLLCPGD*YTADQQC 455
           G+  TN L DL  PG  +TADQQC
Sbjct: 453 GLISTNHLSDLRLPGQRFTADQQC 476


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -2

Query: 523 GIPMTN-LRDLLCPGD*YTADQQC 455
           G+  TN L DL  PG  +TADQQC
Sbjct: 453 GLISTNHLSDLRLPGQRFTADQQC 476


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -2

Query: 523 GIPMTN-LRDLLCPGD*YTADQQC 455
           G+  TN L DL  PG  +TADQQC
Sbjct: 453 GLISTNHLSDLRLPGQRFTADQQC 476


>Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical
           protein K09A9.4 protein.
          Length = 716

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 307 DRHYQGQDA*TQEREQGDSCGACHVKITSTHSTLHHLIPTVCI 435
           DR +Q     T + +   SC  C V + +T ST  H +P V I
Sbjct: 409 DRFFQNS---TLQDDNQYSCSKCEVLVDATKSTKAHRLPEVII 448


>Z54327-8|CAA91121.2|  451|Caenorhabditis elegans Hypothetical
           protein C26D10.3 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 277 DLCAMMVFDNDRHYQGQDA*TQEREQGDSCGACHV 381
           D+CA+   +    +Q +   TQ R+QG+ CG   V
Sbjct: 332 DVCALTTTEPSTLWQQRQLWTQARQQGEVCGRAMV 366


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,423,580
Number of Sequences: 27780
Number of extensions: 408858
Number of successful extensions: 844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)