Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0637
         (870 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   1.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.5  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -2

Query: 713 TMHTAASSSVSGKPTAAPAGDTC 645
           T HT  S +  G P   PA   C
Sbjct: 280 TRHTTTSHNTRGTPRTTPASSRC 302


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 82  TPPLSTPSNSNATKSSGL 99


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 234 TPPMSMFSTASATVTSGL 181
           TPP+S  S ++AT +SGL
Sbjct: 126 TPPLSTPSNSNATKSSGL 143


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
 Frame = +3

Query: 405 LAISDYFRKQYSPGQAQLTLRYG------MNPHQKPAQVFTPETACRSR 533
           L I  Y +  Y P QA  T  YG      +NP         P+  C S+
Sbjct: 424 LGILRYAKGPYQPSQAPPTYDYGIPQGVVLNPLDARCNEIRPDAICVSQ 472


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 456 VGLARASIACGSSPIW 409
           V L+  S+ CGS+ +W
Sbjct: 77  VSLSTCSMLCGSTQLW 92


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 512 RDSLPITTLNGAPGFINLCDA 574
           R S P +T +G+PGF+    A
Sbjct: 71  RISSPSSTKSGSPGFLTYTKA 91


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 416 GLLPQAILARASPTDLKIRYEPTSEAGPGIHTRDSLPIT 532
           G+   A  + A+PT   +  E      PG  T  +LP+T
Sbjct: 301 GVNDDAFNSVATPTPTSVMTELYPSPVPGHSTSPNLPLT 339


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 405 LAISDYFRKQYSPGQAQLTLRYGM 476
           L I  Y +  Y P QA  T  YG+
Sbjct: 424 LGILRYAKGPYQPSQAPPTYDYGI 447


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 228 PMSMFSTASATVTSGLDTVWTN 163
           P++  S ASA   S LD  W +
Sbjct: 359 PLTSLSLASAQTLSELDLSWNS 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,762
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)