Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0636
         (801 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.5  
SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.8  

>SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3296

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 301  SKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAE 435
            +K  + K   L  F +L K H +EAR  +++ L++ +PA+    E
Sbjct: 1557 AKFAIHKRIVLQVFHSLLKAHAVEARSVVRQALEILTPAMPARME 1601


>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 739

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 599 GGLSWT-FQFYSDLWAHLSTGLMDRPCLSXVRRPTSVPA 712
           GG+ W  F F+ ++W HL     ++  +    +PT+ PA
Sbjct: 392 GGIDWNPFHFFRNIWHHLKGDDKEKRPILTTSQPTTSPA 430


>SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 707

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 368 SRQGKLYRNCWTFLVLHC-KTMPSYVKRLS*SRRTYKCTCLLKSE 499
           +R G+ Y+        HC KT+P   K L   R  Y  +C++K E
Sbjct: 512 NRDGRKYKEAKGIRKWHCVKTLPQQEKVLVRHRTCYYVSCIVKDE 556


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,349,968
Number of Sequences: 59808
Number of extensions: 565684
Number of successful extensions: 1326
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)