Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0636
(801 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M55150-1|AAA52422.1| 419|Homo sapiens fumarylacetoacetate hydro... 103 6e-22
BT007160-1|AAP35824.1| 419|Homo sapiens fumarylacetoacetate hyd... 103 6e-22
BC002527-1|AAH02527.1| 419|Homo sapiens fumarylacetoacetate hyd... 103 6e-22
X51728-1|CAA36016.1| 349|Homo sapiens protein ( Human mRNA for ... 81 6e-15
BX537608-1|CAD97795.1| 349|Homo sapiens hypothetical protein pr... 81 6e-15
AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain conta... 31 3.7
AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein. 31 3.7
>M55150-1|AAA52422.1| 419|Homo sapiens fumarylacetoacetate
hydrolase protein.
Length = 419
Score = 103 bits (248), Expect = 6e-22
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
Frame = +1
Query: 253 LDLNIISRLFDGPLLKSKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNA 432
LDL+II LF GP+L Q+VF + LN+FM L + W EAR LQ LL VS L+++
Sbjct: 41 LDLSIIKHLFTGPVLSKHQDVFNQPTLNSFMGLGQAAWKEARVFLQNLLSVSQARLRDDT 100
Query: 433 ELREKAFVKQTDVQMHVPVEVGDYT--ASIRRCSTLPT*A*CSGER--RPLCSRTGNIYR 600
ELR+ AF+ Q MH+P +GDYT S R+ +T E P Y
Sbjct: 101 ELRKCAFISQASATMHLPATIGDYTDFYSSRQHATNVGIMFRDKENALMPNWLHLPVGYH 160
Query: 601 WVIMDVPVL**SLGTPIHRPYGQTLPVEXAAPHFGPCRLMDFELEV 738
V V GTPI RP GQ P + P +G C+L+D ELE+
Sbjct: 161 GRASSVVV----SGTPIRRPMGQMKPDDSKPPVYGACKLLDMELEM 202
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +3
Query: 510 FYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISG 641
FYSS QHATNVGIMFR KE AL NW HLPVGYHGR+SS+V+SG
Sbjct: 127 FYSSRQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVVSG 170
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +2
Query: 137 SFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWI 253
SFI + DSDFPI NLPYGVF++ + + IGVAIG+ I
Sbjct: 2 SFIPVAEDSDFPIHNLPYGVFSTRGDPRPRIGVAIGDQI 40
>BT007160-1|AAP35824.1| 419|Homo sapiens fumarylacetoacetate
hydrolase (fumarylacetoacetase) protein.
Length = 419
Score = 103 bits (248), Expect = 6e-22
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
Frame = +1
Query: 253 LDLNIISRLFDGPLLKSKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNA 432
LDL+II LF GP+L Q+VF + LN+FM L + W EAR LQ LL VS L+++
Sbjct: 41 LDLSIIKHLFTGPVLSKHQDVFNQPTLNSFMGLGQAAWKEARVFLQNLLSVSQARLRDDT 100
Query: 433 ELREKAFVKQTDVQMHVPVEVGDYT--ASIRRCSTLPT*A*CSGER--RPLCSRTGNIYR 600
ELR+ AF+ Q MH+P +GDYT S R+ +T E P Y
Sbjct: 101 ELRKCAFISQASATMHLPATIGDYTDFYSSRQHATNVGIMFRDKENALMPNWLHLPVGYH 160
Query: 601 WVIMDVPVL**SLGTPIHRPYGQTLPVEXAAPHFGPCRLMDFELEV 738
V V GTPI RP GQ P + P +G C+L+D ELE+
Sbjct: 161 GRASSVVV----SGTPIRRPMGQMKPDDSKPPVYGACKLLDMELEM 202
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +3
Query: 510 FYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISG 641
FYSS QHATNVGIMFR KE AL NW HLPVGYHGR+SS+V+SG
Sbjct: 127 FYSSRQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVVSG 170
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +2
Query: 137 SFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWI 253
SFI + DSDFPI NLPYGVF++ + + IGVAIG+ I
Sbjct: 2 SFIPVAEDSDFPIHNLPYGVFSTRGDPRPRIGVAIGDQI 40
>BC002527-1|AAH02527.1| 419|Homo sapiens fumarylacetoacetate
hydrolase (fumarylacetoacetase) protein.
Length = 419
Score = 103 bits (248), Expect = 6e-22
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
Frame = +1
Query: 253 LDLNIISRLFDGPLLKSKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNA 432
LDL+II LF GP+L Q+VF + LN+FM L + W EAR LQ LL VS L+++
Sbjct: 41 LDLSIIKHLFTGPVLSKHQDVFNQPTLNSFMGLGQAAWKEARVFLQNLLSVSQARLRDDT 100
Query: 433 ELREKAFVKQTDVQMHVPVEVGDYT--ASIRRCSTLPT*A*CSGER--RPLCSRTGNIYR 600
ELR+ AF+ Q MH+P +GDYT S R+ +T E P Y
Sbjct: 101 ELRKCAFISQASATMHLPATIGDYTDFYSSRQHATNVGIMFRDKENALMPNWLHLPVGYH 160
Query: 601 WVIMDVPVL**SLGTPIHRPYGQTLPVEXAAPHFGPCRLMDFELEV 738
V V GTPI RP GQ P + P +G C+L+D ELE+
Sbjct: 161 GRASSVVV----SGTPIRRPMGQMKPDDSKPPVYGACKLLDMELEM 202
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +3
Query: 510 FYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISG 641
FYSS QHATNVGIMFR KE AL NW HLPVGYHGR+SS+V+SG
Sbjct: 127 FYSSRQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVVSG 170
Score = 50.8 bits (116), Expect = 6e-06
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +2
Query: 137 SFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWI 253
SFI + DSDFPI NLPYGVF++ + + IGVAIG+ I
Sbjct: 2 SFIPVAEDSDFPIHNLPYGVFSTRGDPRPRIGVAIGDQI 40
>X51728-1|CAA36016.1| 349|Homo sapiens protein ( Human mRNA for
fumarylacetoacetase (EC 3.7.1.2). ).
Length = 349
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +3
Query: 510 FYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISG 641
FYSS QHATNVGIMFR KE AL NW HLPVGYHGR+SS+V+SG
Sbjct: 57 FYSSRQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVVSG 100
Score = 70.9 bits (166), Expect = 5e-12
Identities = 51/136 (37%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Frame = +1
Query: 343 MALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDVQMHVPVEVGDYT--ASI 516
M L + W EAR LQ LL VS L+++ ELR+ AF+ Q MH+P +GDYT S
Sbjct: 1 MGLGQAAWKEARVFLQNLLSVSQARLRDDTELRKCAFISQASATMHLPATIGDYTDFYSS 60
Query: 517 RRCSTLPT*A*CSGER--RPLCSRTGNIYRWVIMDVPVL**SLGTPIHRPYGQTLPVEXA 690
R+ +T E P Y V V GTPI RP GQ P +
Sbjct: 61 RQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVV----SGTPIRRPMGQMKPDDSK 116
Query: 691 APHFGPCRLMDFELEV 738
P +G C+L+D ELE+
Sbjct: 117 PPVYGACKLLDMELEM 132
>BX537608-1|CAD97795.1| 349|Homo sapiens hypothetical protein
protein.
Length = 349
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +3
Query: 510 FYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISG 641
FYSS QHATNVGIMFR KE AL NW HLPVGYHGR+SS+V+SG
Sbjct: 57 FYSSRQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVVSG 100
Score = 70.9 bits (166), Expect = 5e-12
Identities = 51/136 (37%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Frame = +1
Query: 343 MALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDVQMHVPVEVGDYT--ASI 516
M L + W EAR LQ LL VS L+++ ELR+ AF+ Q MH+P +GDYT S
Sbjct: 1 MGLGQAAWKEARVFLQNLLSVSQARLRDDTELRKCAFISQASATMHLPATIGDYTDFYSS 60
Query: 517 RRCSTLPT*A*CSGER--RPLCSRTGNIYRWVIMDVPVL**SLGTPIHRPYGQTLPVEXA 690
R+ +T E P Y V V GTPI RP GQ P +
Sbjct: 61 RQHATNVGIMFRDKENALMPNWLHLPVGYHGRASSVVV----SGTPIRRPMGQMKPDDSK 116
Query: 691 APHFGPCRLMDFELEV 738
P +G C+L+D ELE+
Sbjct: 117 PPVYGACKLLDMELEM 132
>AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 798
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 292 LLKSKQNVFKEEKLNAFMALTKPHWIEARE-TLQKLLDVSSPALQNNAELREKAFVKQTD 468
L+K KQ + EE++N + PH +E++ S + N E+ + + D
Sbjct: 87 LVKIKQEILPEERMNGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPE-D 145
Query: 469 VQMHVPVEVGD 501
V+ +V +E GD
Sbjct: 146 VEGNVQLETGD 156
>AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein.
Length = 826
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 292 LLKSKQNVFKEEKLNAFMALTKPHWIEARE-TLQKLLDVSSPALQNNAELREKAFVKQTD 468
L+K KQ + EE++N + PH +E++ S + N E+ + + D
Sbjct: 115 LVKIKQEILPEERMNGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPE-D 173
Query: 469 VQMHVPVEVGD 501
V+ +V +E GD
Sbjct: 174 VEGNVQLETGD 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,821,556
Number of Sequences: 237096
Number of extensions: 2540125
Number of successful extensions: 5096
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5096
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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