Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0636
         (801 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39852-6|AAK39259.1|  418|Caenorhabditis elegans Hypothetical pr...   118   4e-27
U00066-1|AAA50742.1|  490|Caenorhabditis elegans High incidence ...    29   5.1  
U41557-1|AAA83300.1|  418|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z83218-3|CAB05688.1|  330|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z81127-8|CAB03393.2|  495|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z77652-14|CAB01123.2|  495|Caenorhabditis elegans Hypothetical p...    28   8.9  
U28928-2|AAA68335.2|  329|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AF016444-1|AAN73876.2|  330|Caenorhabditis elegans Serpentine re...    28   8.9  

>U39852-6|AAK39259.1|  418|Caenorhabditis elegans Hypothetical
           protein K10C2.4 protein.
          Length = 418

 Score =  118 bits (285), Expect = 4e-27
 Identities = 69/168 (41%), Positives = 98/168 (58%), Gaps = 6/168 (3%)
 Frame = +1

Query: 253 LDLNIISRLFDGPLLKSKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNA 432
           L+L  I+ LFDGP LK+ Q+VFK+  LNAFMAL +P W+EAR  +Q+LL      L++NA
Sbjct: 42  LNLAEIANLFDGPQLKAHQDVFKQSTLNAFMALPRPAWLEARARIQQLLSEDCAVLRDNA 101

Query: 433 ELREKAFVKQTDVQMHVPVEVGDYT---ASIRRCSTLPT*A*CSGERRPLCSRTGNIYRW 603
            LR +A V Q+D  MH+P ++GDYT   +SI   + +       G+   L       ++W
Sbjct: 102 HLRSRALVAQSDATMHLPAQIGDYTDFYSSIHHATNVG--IMFRGKENALMPN----WKW 155

Query: 604 VIMDVPVL**SL---GTPIHRPYGQTLPVEXAAPHFGPCRLMDFELEV 738
           + +       S+   GT + RP GQT   +   P FGP +LMDFELE+
Sbjct: 156 LPVGYHGRASSIVVSGTDLKRPVGQTKAPDAEVPSFGPSKLMDFELEM 203



 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +3

Query: 510 FYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISG 641
           FYSS+ HATNVGIMFRGKE AL  NWK LPVGYHGR+SSIV+SG
Sbjct: 128 FYSSIHHATNVGIMFRGKENALMPNWKWLPVGYHGRASSIVVSG 171



 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +2

Query: 131 MKSFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWI 253
           MKSF+    +SDFPI+NLPYGVF++  ++ +HIGVAIG+ I
Sbjct: 1   MKSFVSVPQNSDFPIQNLPYGVFSTKADSSRHIGVAIGDQI 41


>U00066-1|AAA50742.1|  490|Caenorhabditis elegans High incidence of
           males (increasedx chromosome loss) protein 10 protein.
          Length = 490

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 295 LKSKQNVFKEEKLNAFMALTKPH-WIEARETLQKLLDVSSPALQNNAELREK 447
           L++++     EK N  + + K H W E RE +  L+DV S  L+   E+ E+
Sbjct: 278 LEAREICINSEK-NVPVIIEKIHQWTEVREVIIDLIDVESENLRKLKEMEEQ 328


>U41557-1|AAA83300.1|  418|Caenorhabditis elegans Hypothetical
           protein C50F7.6 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 313 VFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDV 471
           V KEEK  +   +  PH+  + +   K+  V +P  +    + E+    +TD+
Sbjct: 225 VLKEEKRKSSFRIPVPHYFRSSKAKSKVYQVDAPDEEIEEVIDEEKMAAKTDL 277


>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
            protein ZC132.5 protein.
          Length = 1277

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
 Frame = +1

Query: 214  CSKTHRRGDWRMDLDLNIISRLFDGPLLKSKQNVFKEEKLNAF---MALTKPHW-IEARE 381
            C K     + RM + L +   + D  +   + N+ K+E + A    +A+ +  W I  + 
Sbjct: 999  CPKDFINPEMRMTIPLQVTKDMMDEYIPPEEINLTKQETIEALQSSVAIIEDIWKIWNKT 1058

Query: 382  TLQKLLDVSSPALQNNAELREKAFVKQ 462
             L +L +     + N  E+ +  FV Q
Sbjct: 1059 YLSELRETHKLRMDNKREINDSPFVGQ 1085


>Z83218-3|CAB05688.1|  330|Caenorhabditis elegans Hypothetical
           protein C31A11.6 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 225 TSAWRLENGFRFEYYFTFIRWPATKKQAKCIQGREIKRVYGTDQTS 362
           T  +RLE      ++  ++  P+T+K  K   G E+K+ + T + S
Sbjct: 275 TFYFRLETICAINFFVYYLGSPSTRKMLKKYLGAEVKKEFSTRKVS 320


>Z81127-8|CAB03393.2|  495|Caenorhabditis elegans Hypothetical
           protein C06B3.3 protein.
          Length = 495

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
 Frame = +1

Query: 211 KCSKTHRRGDWRMDLDLNIISRLFDGPLLKSKQNVFKE--EKLNAFMALTKPHWIEARET 384
           K S+    GD+  ++D N +  + D  LLK KQN   +  ++ N  M +T   WI  +ET
Sbjct: 253 KRSRDFMNGDY--EIDPNNVEDIVDAFLLKMKQNPKSDVYDENNLKMLIT-DLWITGQET 309

Query: 385 LQKLLDVSSPALQNNAELR---EKAFVKQTD 468
               L  +     NN ++    +K  +K T+
Sbjct: 310 TTTTLVSAFIQFLNNPQVMDTVQKELIKVTN 340


>Z77652-14|CAB01123.2|  495|Caenorhabditis elegans Hypothetical
           protein C06B3.3 protein.
          Length = 495

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
 Frame = +1

Query: 211 KCSKTHRRGDWRMDLDLNIISRLFDGPLLKSKQNVFKE--EKLNAFMALTKPHWIEARET 384
           K S+    GD+  ++D N +  + D  LLK KQN   +  ++ N  M +T   WI  +ET
Sbjct: 253 KRSRDFMNGDY--EIDPNNVEDIVDAFLLKMKQNPKSDVYDENNLKMLIT-DLWITGQET 309

Query: 385 LQKLLDVSSPALQNNAELR---EKAFVKQTD 468
               L  +     NN ++    +K  +K T+
Sbjct: 310 TTTTLVSAFIQFLNNPQVMDTVQKELIKVTN 340


>U28928-2|AAA68335.2|  329|Caenorhabditis elegans Hypothetical
           protein C44B7.4 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 159 IQIFQSKIYR---TVCLRLIKMLKNTSAWRLENGFRFEYYFTFIRWPAT 296
           + I+ S ++    T  L LI +  N++ W+L +GF F    T   W  T
Sbjct: 52  LNIYHSLVFMFGPTAALLLIGITVNSTTWKLAHGFFFRVRDTRHSWKTT 100


>AF016444-1|AAN73876.2|  330|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 9 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 335 FNFSS-LNTFCLLFSSGPSNKREIIFKSKSILQSPRRCVFEHFYQ 204
           FNFS  +  +C+   SG  +  E+I     ++Q   R +FE+ ++
Sbjct: 167 FNFSEPVMNYCMAIKSGSVSNAEMISTISLVIQVVGRILFEYLFK 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,783,772
Number of Sequences: 27780
Number of extensions: 417924
Number of successful extensions: 1070
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)