Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0635
         (572 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688...    29   3.5  
10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257     28   4.6  

>01_06_0996 +
           33667663-33667900,33668019-33668091,33668785-33668841,
           33668970-33669067,33669482-33669637,33669744-33670366,
           33670484-33670560,33671551-33671805,33671950-33672067,
           33672174-33672345,33672434-33672975
          Length = 802

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 473 YTIAXKSTHPEPAGGAFHMTWTSVLGRSSASTTEXVH 363
           Y    KSTHP+    + H   T+VLG    S    +H
Sbjct: 97  YHFKGKSTHPDDVIASHHDMLTTVLGSKEDSLASIIH 133


>10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257
          Length = 421

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 316 PVCWAPSLCPGSKD 275
           PVCWAP   PGS D
Sbjct: 241 PVCWAPPSAPGSYD 254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,224,581
Number of Sequences: 37544
Number of extensions: 278609
Number of successful extensions: 633
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)