Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0635
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens ...    61   2e-09
AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.       61   2e-09
AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.     61   2e-09
U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.                 37   0.044
AC073208-1|AAP22355.1|   44|Homo sapiens unknown protein.              35   0.23 

>AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90322 fis, clone NT2RP2001755, highly similar to
           Rattus norvegicus f-spondin mRNA. ).
          Length = 807

 Score = 61.3 bits (142), Expect = 2e-09
 Identities = 32/95 (33%), Positives = 47/95 (49%)
 Frame = +1

Query: 256 GFKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPP 435
           GF +I    N +  +     G FQ+  +  T+F   C  +V E+    +T +QV W APP
Sbjct: 92  GFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPP 151

Query: 436 AGSGCVLXKAMVYXNGESLVR*RR*LTKXICEDXS 540
           AG+GCV+ KA +        +    LTK +CE  S
Sbjct: 152 AGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDS 186


>AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.
          Length = 807

 Score = 61.3 bits (142), Expect = 2e-09
 Identities = 32/95 (33%), Positives = 47/95 (49%)
 Frame = +1

Query: 256 GFKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPP 435
           GF +I    N +  +     G FQ+  +  T+F   C  +V E+    +T +QV W APP
Sbjct: 92  GFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPP 151

Query: 436 AGSGCVLXKAMVYXNGESLVR*RR*LTKXICEDXS 540
           AG+GCV+ KA +        +    LTK +CE  S
Sbjct: 152 AGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDS 186


>AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.
          Length = 724

 Score = 61.3 bits (142), Expect = 2e-09
 Identities = 32/95 (33%), Positives = 47/95 (49%)
 Frame = +1

Query: 256 GFKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPP 435
           GF +I    N +  +     G FQ+  +  T+F   C  +V E+    +T +QV W APP
Sbjct: 9   GFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPP 68

Query: 436 AGSGCVLXKAMVYXNGESLVR*RR*LTKXICEDXS 540
           AG+GCV+ KA +        +    LTK +CE  S
Sbjct: 69  AGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDS 103


>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
          Length = 3460

 Score = 37.1 bits (82), Expect = 0.044
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 364 CTXSVVEADDLPKTEVQVMWKAPPAGSGCVLXKAMVYXNGESLVR*RR*LTKXICE 531
           C+        LP T +  +W APPAG+GCV   A     G+ + +    L + +CE
Sbjct: 126 CSVVASHVSHLPTTNLSFIWIAPPAGTGCVNFMATATHRGQVIFKDA--LAQQLCE 179


>AC073208-1|AAP22355.1|   44|Homo sapiens unknown protein.
          Length = 44

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 364 CTXSVVEADDLPKTEVQVMWKAPPAGSGCV 453
           C+        LP T +  +W APPAG+GCV
Sbjct: 13  CSVVASHVSHLPTTNLSFIWIAPPAGTGCV 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,620,285
Number of Sequences: 237096
Number of extensions: 1413739
Number of successful extensions: 3175
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3175
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)