Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0635
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 36 0.020
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 7.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 7.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 7.2
AF098987-5|ABD63222.1| 263|Caenorhabditis elegans Hypothetical ... 27 7.2
AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical ... 27 7.2
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 27 7.2
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 27 7.2
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 27 7.2
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 27 7.2
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 27 7.2
AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical ... 27 9.5
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 364 CTXSVVEADDLP-KTEVQVMWKAPPAGSGCVLXKAMV 471
C S V +L KT V +MWKAP SGCV+ +A V
Sbjct: 118 CRQSGVSHANLKSKTSVHMMWKAPEVSSGCVVFRASV 154
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Frame = +2
Query: 104 LNPGPXVGSKSPGDNHYRLIVNGEVER-------YAPDQRYVVTLVGSRTHDVXQQFXAS 262
+ P G KSPG N Y + +NG + + P + Y V++ G RT + F
Sbjct: 29 IKPYEAKGDKSPGSNGYVIEINGTTTKSMDISKGFVPGEIYKVSIRGWRTQYTVKTFRGF 88
Query: 263 K*SXIL*TRTQGG 301
S + T G
Sbjct: 89 VVSSLFEDNTSAG 101
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AF098987-5|ABD63222.1| 263|Caenorhabditis elegans Hypothetical
protein F40H3.1b protein.
Length = 263
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 124 RFKVTWRQSLQADC*RRS*AICAGSEICR 210
R K+ WRQS+ +C +S A CA E C+
Sbjct: 201 RSKIRWRQSVCEEC--KSVAECANCEECK 227
>AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical
protein F40H3.1a protein.
Length = 496
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 124 RFKVTWRQSLQADC*RRS*AICAGSEICR 210
R K+ WRQS+ +C +S A CA E C+
Sbjct: 434 RSKIRWRQSVCEEC--KSVAECANCEECK 460
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 259 FKIILDPLNPDTRRAPSKQGQFQLFXDTLTKFDEECTXSVVEADDLPKTEVQVMWKAPPA 438
F IL+P + R +PS +G+ LF +T E +++ L K V PPA
Sbjct: 567 FANILNPKKREERLSPSGKGKHLLFAPRITAHPSESVFKILDGSPL-KLRVMAS-SLPPA 624
>AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical
protein Y47H9C.8 protein.
Length = 389
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 346 TKFDEECTXSVVEADDLPKTEVQVMWKAPPAGSGCVLXKAMVYXNGESLVR 498
+KF + T ++ EA ++P V APP G + + + ESL+R
Sbjct: 298 SKFRQCVTDALNEAREMPYNTVTRELMAPPRGKPVDMHHCVTWRQYESLIR 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,080,600
Number of Sequences: 27780
Number of extensions: 216777
Number of successful extensions: 459
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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