Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0632
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    29   0.048
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.19 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.78 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   3.1  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   3.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   4.2  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 0.048
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +3

Query: 417 PLNPKANREKMTQIMFETFNT-PAMYVAIQAVSRCTRPVVPPVS-CWTPATVSPTPCPST 590
           PL    NR    Q  +      PAM V  +   RC   VVPP   C  P+T+ P P    
Sbjct: 165 PLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLRC---VVPPTEDCDVPSTIPPPPPEED 221

Query: 591 KDTHSP 608
            D++ P
Sbjct: 222 DDSNIP 227


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
 Frame = +3

Query: 489 YVAIQAVSRCTRPVVPPVSCWTPATVSPTPCP-STKDTHSPTPSCVWT*PVATFTDYLM- 662
           Y     V   T  + P ++CW+  +  P P   S + T S +P+ ++  PV   T+    
Sbjct: 304 YSTWSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQIYQ-PVTNLTNLTYP 362

Query: 663 KILTERGYFVHYQPPSGKSFV 725
               +     HYQ P   S V
Sbjct: 363 SYYNQDVSCTHYQNPEYISVV 383


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 315 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 410
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 187 GTRREEHHLLRNRP 146
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 704 AEREIVRDIKEKLCYVALDLSRKWP 778
           A+R + +  KEKL  +A+ +  +WP
Sbjct: 6   ADRLMTQRCKEKLNTLAISVMNQWP 30


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 262 SSPHKSPSVPYRPSRPDGGA 203
           ++P+KS + PY P+ P  G+
Sbjct: 63  NTPNKSSTSPYPPNHPLSGS 82


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 777 QPLHPAAPSRSLRTFPTVRSSLSETKVP 860
           QPLHP+ P      +P    SL  +  P
Sbjct: 67  QPLHPSVPRLGHPQWPFAWGSLXRSSSP 94


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/52 (25%), Positives = 22/52 (42%)
 Frame = +3

Query: 189 LDRGKAPPSGRDGRYGTEGLLCGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 344
           LD+G+  P G+  +      L  D A+    +      + H ++ N  DM K
Sbjct: 46  LDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHLIDNKPDMWK 97


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 187 GTRREEHHLLRNRP 146
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 187 GTRREEHHLLRNRP 146
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 284 PDPQIPHRTRNRH 322
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 772 MANRCIQQLPREVYELSRRSGHHYRKR 852
           + N   Q   R+V  + +R  H YRKR
Sbjct: 216 LVNSLYQNATRKVCGVWKRIPHDYRKR 242


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 353 MPNLLHVIPVSDDSVFD 303
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,230
Number of Sequences: 336
Number of extensions: 5485
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)