Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0631
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701...    28   8.2  

>03_02_0270 -
           7011363-7012302,7013237-7013640,7014264-7014333,
           7014835-7015331,7015959-7016283,7018060-7018292
          Length = 822

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 21/75 (28%), Positives = 28/75 (37%)
 Frame = -2

Query: 474 PSSIXKDFLRASSVCPPDERYASSNEWYTEKGEKNMLSSGTASLIVLKRFNVNPSWPLYK 295
           PS      L   S C P  R+  SNE  T       +    A++I  +     P WP Y 
Sbjct: 156 PSLSRWHLLELLSSCLP-HRFTHSNE--TSLSVLQSMKEDIANMIAPQLIRPIPRWPFYA 212

Query: 294 AVRASGFSFLEESFC 250
            +  + F  L  S C
Sbjct: 213 FLGGAMFCLLASSTC 227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,205,646
Number of Sequences: 37544
Number of extensions: 445983
Number of successful extensions: 1086
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)