Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0631
         (853 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      34   0.13 
SB_69| Best HMM Match : No HMM Matches (HMM E-Value=.)                 29   4.8  
SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016)                28   8.4  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = +1

Query: 535 NNSDSYEFTSANKLFAADDLNV----RQCMLDLFAEDLETLNFRENPGAARDYINSWVSR 702
           +NSD  +   AN+LFA     +    ++   + F+ ++  +++ +N   ARD +N WV +
Sbjct: 80  SNSDGNQILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQ 139



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 317 FTLNLFNTINDAVPDDNIFFSPFSVYHSLLLAYLSSGGQTEEALRKS 457
           F L+L   +       N+F+SP S+  +L + YL + G T   + K+
Sbjct: 13  FALDLHRVLTAQDGQTNLFYSPASIVVALAMTYLGARGNTATQMTKT 59


>SB_69| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 662

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +2

Query: 371 FFSPFSVYHSLLLAYLSSGGQTEEALRKSLXIEDGLDKIN-LMTAYK*TNELVV*TTTAI 547
           FF+  S+  +  L  ++   QT EALRKSL     +   N         N  V   +TAI
Sbjct: 66  FFATRSITSTFKLREIAGSHQTVEALRKSLNTMAAMQTFNDSAEIITSMNFTVPPGSTAI 125

Query: 548 VMSLRARTNCSQLMILMCDNAC 613
               RA   C+ ++I+     C
Sbjct: 126 AEEPRAAFVCNAIVIVHITRRC 147


>SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016)
          Length = 832

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 690 AIDVVTGSARIFPEIQS-LEIFGKEIKHALSHIKIISCEQFVRARKLITIAVVV 532
           A  VV G+    PE QS LEI G+E    ++ + ++SCE  V     + +  V+
Sbjct: 14  AESVVMGTDEDLPESQSDLEIGGEEGIPLVNDLMVVSCEAMVELEPRMRMVWVI 67


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,991,992
Number of Sequences: 59808
Number of extensions: 534559
Number of successful extensions: 1319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)