Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0631
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19154-6|CAC35885.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z70680-5|CAA94574.1| 402|Caenorhabditis elegans Hypothetical pr... 29 3.2
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 29 3.2
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 29 3.2
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 4.2
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 4.2
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 28 7.3
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 28 9.7
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 28 9.7
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 28 9.7
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 28 9.7
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 28 9.7
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 28 9.7
>Z19154-6|CAC35885.2| 388|Caenorhabditis elegans Hypothetical
protein C40H1.7 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +2
Query: 164 TIRGHHSNHNEVSNCGIVRRFNGYQPVLLQNDSSKKLNPEARTALYNGQLGFTLNLFNTI 343
++RG H +H + + + FNG P L +KK N + Y+G LG L N I
Sbjct: 137 SVRGSHGDH-QYYDLWKIGNFNGTVPFLNIGRVTKKFNDNFESLWYSG-LGEDLQ--NLI 192
Query: 344 NDAVPDDNIFFSPFSVYHSLLL 409
DA PD ++ + +S+ S+ L
Sbjct: 193 -DAYPDYQLWITGYSMGASIAL 213
>Z70680-5|CAA94574.1| 402|Caenorhabditis elegans Hypothetical
protein C25G4.8 protein.
Length = 402
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = -2
Query: 624 KEIKHALSHIKIISCEQFVRARKLITIAVVVYTTSSFVYLYAVIKFILSNPSSIXKDFLR 445
++I + + + I QF + +V Y F+ ++ + L S ++FLR
Sbjct: 313 EDIMYVCNMLIIADDAQFANVQNCCIATLVFYHAHDFIRIFVIGNHPLKERFSRRQEFLR 372
Query: 444 ASSVCPPDERYASSNE 397
S +A+SNE
Sbjct: 373 PSLTMQVKRAFAASNE 388
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 263 SKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVYHSLLLAYLSSGGQTEE 442
S + E L + + F L+L N ++ FSP S+ +L L ++++ G+T +
Sbjct: 2 SDSSSDEKMGLLLHSETDFGLSLLRQQNLT---ESFVFSPLSIALALSLVHVAAKGETRD 58
Query: 443 ALRKSL 460
+RK+L
Sbjct: 59 EIRKAL 64
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 263 SKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVYHSLLLAYLSSGGQTEE 442
S + E L + + F L+L N ++ FSP S+ +L L ++++ G+T +
Sbjct: 2 SDSSSDEKMGLLLHSETDFGLSLLRQQNLT---ESFVFSPLSIALALSLVHVAAKGETRD 58
Query: 443 ALRKSL 460
+RK+L
Sbjct: 59 EIRKAL 64
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 239 PVLLQNDSSKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVY-HSLLL 409
PVL ++ S N + N QL LN ND +PD + F F + HS+ L
Sbjct: 343 PVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQKHSISL 400
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 239 PVLLQNDSSKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVY-HSLLL 409
PVL ++ S N + N QL LN ND +PD + F F + HS+ L
Sbjct: 343 PVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQKHSISL 400
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 239 PVLLQNDSSKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVY-HSLLL 409
PVL ++ S N + N QL LN ND +PD + F F + HS+ L
Sbjct: 343 PVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQKHSISL 400
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = -2
Query: 597 IKIISCEQFVRARKLITIAVVVYTTSSFVYLYAVIKFILSNPSSIXKDFLRASSVCPPDE 418
++ ISC + ++ ++T+ ++Y S LY V +FI + ++ + +SV PP+
Sbjct: 90 LREISCIKDLQHDNIVTLFDIIYANSK---LYMVFEFIDRDLKNLLEMLEPTNSVLPPN- 145
Query: 417 RYASSNEW 394
Y S W
Sbjct: 146 -YVKSFMW 152
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +2
Query: 362 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 460
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +2
Query: 362 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 460
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +2
Query: 362 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 460
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +2
Query: 362 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 460
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +2
Query: 362 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 460
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +2
Query: 362 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 460
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,190,685
Number of Sequences: 27780
Number of extensions: 399847
Number of successful extensions: 1018
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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