Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0631
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      23   2.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.7  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   6.2  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   6.2  

>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 49  TVSLFIIK*YYIL*PSKCSTILPNSQPICSQGEQQLP 159
           TV LF      ++ PSKC  +  + QP+ ++    +P
Sbjct: 13  TVLLFSFVVILLIIPSKCEAVSNDMQPLEARSADLVP 49


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 116 LILNQFARKENNSYLHTIRGHHSNHNEVSNCG 211
           LI    A   N S  + + G+H NH   S  G
Sbjct: 332 LIDRWVANVPNGSVTNWVSGNHDNHRVASRFG 363


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 281 PDSAF*KSHFVEA 243
           PDS F KSH  EA
Sbjct: 58  PDSVFFKSHITEA 70


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 281 PDSAF*KSHFVEA 243
           PDS F KSH  EA
Sbjct: 58  PDSVFFKSHITEA 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,404
Number of Sequences: 438
Number of extensions: 5132
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)