Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0630
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           28   0.10 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   6.7  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   8.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.9  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 0.10
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +2

Query: 74  LQNNRISSPAKEFELFANSPKPSETFT---PKENLSARESPLPIESPLLTEPALSKES 238
           LQ    +S A + + +  +P PS+  T   P   +     P P+ SPL+ EP  S  S
Sbjct: 52  LQVRPSTSAAADVDGWQVTPLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSSTTS 109


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 83  NRISSPAKEFELFANSPKPSETFTPKENLSARESPL 190
           N  +SPA   E  A SP P +  TP    S  E PL
Sbjct: 40  NSAASPAPPEEEAA-SPTPGDVPTPSSPRSISEDPL 74


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 128 SPKPSETFTPKENLSARESPLPIESPLLTE 217
           SP P E  TP ++ S++       S  L E
Sbjct: 102 SPPPEERLTPSKDASSKRIXTAFTSTQLLE 131


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 492 DCGKWMVCLNGRFR 451
           DC K+ +CL G  R
Sbjct: 177 DCRKYYICLEGTAR 190


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 492 DCGKWMVCLNGRFR 451
           DC K+ +CL G  R
Sbjct: 177 DCRKYYICLEGTAR 190


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 513  GKYWVVIDCGKWMVCLNG 460
            G+Y+    C  + VC+NG
Sbjct: 1210 GQYYPHESCSSFYVCVNG 1227


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 543 RETTTELDDSVKVTKDSRSNSP 608
           R  T  LDD   V   +RSNSP
Sbjct: 8   RMPTGHLDDDDFVVVKTRSNSP 29


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 543 RETTTELDDSVKVTKDSRSNSP 608
           R  T  LDD   V   +RSNSP
Sbjct: 8   RMPTGHLDDDDFVVVKTRSNSP 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,757
Number of Sequences: 336
Number of extensions: 3381
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)