Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0630
         (817 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.91 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   6.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.4  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    24   6.4  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 0.91
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 419 LHYQPRMLLLKRNLPFKQTIHFPQSMTTQYFPP 517
           LHY P MLL+KR  P K  + +   M     PP
Sbjct: 338 LHYLPAMLLMKR--PRKTRLRWMMEMPGMSVPP 368


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 268 ESPFHAESPLPAECPLSDE 324
           E PF+A SPL ++   SDE
Sbjct: 89  EKPFYAPSPLGSDSYASDE 107


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 407  YRRNLHYQPRMLLLKRNLPFKQTIH 481
            Y+R+  Y+P  LLL    P ++  H
Sbjct: 1805 YKRSYSYEPHNLLLSNLFPPREGFH 1829


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 238 TITFRLPLHIESPFHAESPLPAECPLSDEHDVPV 339
           T+    P+ +E PF  E     E P+   + VPV
Sbjct: 227 TVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPV 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,902
Number of Sequences: 2352
Number of extensions: 12559
Number of successful extensions: 62
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)