Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0630
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 29 5.3
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 9.2
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 77 QNNRISSPAKEFELFANSPKPSETFTPKENLSARESPLPIESPLLTE 217
+N IS P KE + N+ P + ++ +S ES LPIE+ + TE
Sbjct: 606 ENETISQPGKEEDDLENANDPDDETIVEKIVSMAESSLPIEAVISTE 652
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 77 QNNRISSPAKEFELFANSPKPSETFTPKENLSARESPLPIESPLLTE 217
+N IS P KE + N+ P + ++ +S ES LPIE+ + TE
Sbjct: 606 ENETISQPGKEEDDLENANDPDDETIVEKIVSMAESSLPIEAVISTE 652
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 77 QNNRISSPAKEFELFANSPKPSETFTPKENLSARESPLPIESPLLTE 217
+N IS P KE + N+ P + ++ +S ES LPIE+ + TE
Sbjct: 606 ENETISQPGKEEDDLENANDPDDETIVEKIVSMAESSLPIEAVISTE 652
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +2
Query: 92 SSPAKEFELFANSPKPSETFTPKENLSARE------SPLPIESPLLTEP 220
S P +E ELFA P+P+ T E + R+ PLPI ++ +P
Sbjct: 503 SDPKEELELFAVYPQPTNTEAETEEATLRKIHLERGDPLPILEDIVYQP 551
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +2
Query: 92 SSPAKEFELFANSPKPSETFTPKENLSARE------SPLPIESPLLTEP 220
S P +E ELFA P+P+ T E + R+ PLPI ++ +P
Sbjct: 500 SDPKEELELFAVYPQPTNTEAETEEATLRKIHLERGDPLPILEDIVYQP 548
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +2
Query: 92 SSPAKEFELFANSPKPSETFTPKENLSARE------SPLPIESPLLTEP 220
S P +E ELFA P+P+ T E + R+ PLPI ++ +P
Sbjct: 501 SDPKEELELFAVYPQPTNTEAETEEATLRKIHLERGDPLPILEDIVYQP 549
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 371 FLLNVFYLKSLLYRRNLHYQPRMLLLKRNLPFKQTIHFPQSMTTQYFPPASCY 529
F +N++ L S + + + Y+P +LL+ + F S+ YF CY
Sbjct: 20 FHINLYLLFSTFFTKKVCYRPELLLIYCKIAADICYSFTVSIMKSYFLVILCY 72
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 525 ATSPEPRETTTEL-DDSVKVTKDSRSNSPLP 614
AT+P P TTT + ++ VKV+ S + P P
Sbjct: 117 ATTPTPEPTTTPVEEEKVKVSPSSSTKEPSP 147
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 637 ESPIPAESHIPVDDLITSIXTALESTXPGSGSVEDQPEVERE-KSDVP---LERVRTEVV 804
ES +P++SHIP++ + L S P ++ PE + + K +P L +V+TE
Sbjct: 1469 ESSLPSKSHIPIE-----VKPKLSSLLPWVSDTDESPEQKHKLKKTMPSINLLKVKTEPP 1523
Query: 805 E 807
E
Sbjct: 1524 E 1524
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 637 ESPIPAESHIPVDDLITSIXTALESTXPGSGSVEDQPEVERE-KSDVP---LERVRTEVV 804
ES +P++SHIP++ + L S P ++ PE + + K +P L +V+TE
Sbjct: 1455 ESSLPSKSHIPIE-----VKPKLSSLLPWVSDTDESPEQKHKLKKTMPSINLLKVKTEPP 1509
Query: 805 E 807
E
Sbjct: 1510 E 1510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,250,758
Number of Sequences: 27780
Number of extensions: 305875
Number of successful extensions: 1154
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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