Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0629
(928 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 68 2e-12
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 68 2e-12
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 68 2e-12
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 68 2e-12
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 68 2e-12
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 68 2e-12
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 68 2e-12
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 68 2e-12
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 68 2e-12
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 68 2e-12
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 68 2e-12
SPBC215.03c |csn1||COP9/signalosome complex subunit Csn1|Schizos... 29 1.2
SPBC14C8.05c |meu17||glucan-alpha-1,4-glucosidase|Schizosaccharo... 28 1.6
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 27 2.8
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 27 5.0
SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces pomb... 27 5.0
SPBC800.11 |||inosine-uridine preferring nucleoside hydrolase |S... 27 5.0
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 5.0
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 26 6.6
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 26 8.7
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 50.4 bits (115), Expect = 4e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAP 542
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 354 LKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
+K+ V+ Y D+IL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 556 VKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 50.4 bits (115), Expect = 4e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAP 542
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 354 LKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
+K+ V+ Y D+IL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 556 VKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 50.4 bits (115), Expect = 4e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAP 542
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 354 LKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
+K+ V+ Y D+IL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 556 VKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+VK++G+ IS++G +P ++ + VL K+PK + LR FL + ++ RKFIP +++ PL
Sbjct: 607 QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666
Query: 686 TRLTKKSYVWEWS 724
L KK W+W+
Sbjct: 667 NNLLKKDVRWKWT 679
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKKR--L 177
GII E ++ + P + VPK G R VDY+ LN K + YP+P I++LL +
Sbjct: 439 GIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIF 498
Query: 178 RDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + L+ V+ P G++ + MP+G+ AP
Sbjct: 499 TKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 357 KDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRANRDKCVF 497
K+ V+ Y DDIL+ S S H+ ++ V +L+ L N+ KC F
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 603
>SPBC215.03c |csn1||COP9/signalosome complex subunit
Csn1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 458 AETVEYCTEI*KVALV*I*DYQYIIKIG*YGNVLKRGSRSKS-IYKSLERSGAFFSPNGI 282
A+ EYCT ++A + + + I IG Y +VL GSR+KS + ++E + ++ G+
Sbjct: 136 AKVREYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTVSAAMELTSPIYAYCGL 195
>SPBC14C8.05c
|meu17||glucan-alpha-1,4-glucosidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 450
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 282 YAIWTKECATTFQRLIDRFRSGSSLKDVTVLAYFDDIL 395
Y W ++ A T ++DRF G + ++ Y D+++
Sbjct: 77 YYQWVRDSALTIMTILDRFFEGDKGLEPIIVKYMDEMV 114
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 398 YQYIIKIG*YG--NVLKRGSRSKSI-YKSLERSGAFFSPNGIRLKRYIPNG 255
Y+Y ++ YG NV G R + Y +L++ A SPN Y PNG
Sbjct: 295 YEYSQEVNDYGLVNVSSTGERVLTTDYNNLKKQWASISPNITYKHSYNPNG 345
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 339 RSGSSLKDVTVLAYFDDILVISDSYQRHLSDLR 437
++GSS+ T+ A+ ++I DSY ++LS ++
Sbjct: 156 QAGSSITVGTMYAFLKKTVIIDDSYLQYLSTVK 188
>SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 351
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 723 VLEQSKAFEIS*EVLTTSPXLVQADYTKPFLLRTDSSNYAFGCCSNAR 866
V + A++ + L++S + A+++ LL T+ YAFG C A+
Sbjct: 226 VAAECDAWQANNSELSSSICSISANWSTLSLLSTEGCVYAFGRCDRAQ 273
>SPBC800.11 |||inosine-uridine preferring nucleoside hydrolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 389
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 653 IPDFAKVAEPLTRLTKKSYVWEWSFGA 733
IP FA A+PL R +W+ +G+
Sbjct: 81 IPSFAGAAQPLLRTNNTFQIWQELYGS 107
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 107 LSQRVMRILCHALTSCC-SQLKKGCVMSSCDLRSGYWQCSIKDQDKTAFVNRSVCIVSSV 283
+S+ + RI + C + ++ C S +R+G + D+ AF++ ++CI +
Sbjct: 1 MSESLTRIAIVSEDKCRPKKCRQECRRSCPVVRTGKLCIEVNPTDRIAFISETLCIGCGI 60
Query: 284 C 286
C
Sbjct: 61 C 61
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 49 LVPKANGGYRFCVDYRRLNAVTKGDAYPMP 138
+ K+NGG +C + ++LN T + MP
Sbjct: 329 MTSKSNGGVAYCYNAQKLNNATGPVTFNMP 358
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 146 TSCCSQLKKGCVMS 187
TSCCSQ KK C S
Sbjct: 269 TSCCSQEKKSCCTS 282
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,689,797
Number of Sequences: 5004
Number of extensions: 74860
Number of successful extensions: 269
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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