Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0629
(928 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 75 2e-13
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 73 4e-13
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 72 1e-12
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 69 1e-11
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 67 4e-11
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 67 4e-11
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 66 5e-11
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 66 5e-11
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 66 5e-11
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 66 5e-11
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 66 5e-11
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 66 5e-11
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 66 6e-11
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 66 9e-11
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 64 2e-10
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 63 5e-10
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 63 5e-10
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 63 6e-10
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 63 6e-10
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 61 2e-09
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 59 7e-09
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 59 7e-09
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 59 7e-09
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 58 1e-08
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 58 1e-08
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 58 1e-08
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 58 1e-08
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 58 2e-08
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 58 2e-08
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 58 2e-08
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 56 5e-08
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 48 2e-05
AY113484-1|AAM29489.1| 558|Drosophila melanogaster RE45347p pro... 33 0.73
AE014297-4260|AAF56810.2| 558|Drosophila melanogaster CG10000-P... 33 0.73
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 74.5 bits (175), Expect = 2e-13
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELL-QSTKKRLR 180
G I +S +++P VLV K G R CVD+R+LN +T D YP+P ID+LL + +K +
Sbjct: 743 GFIRPSDSEYASPIVLVKKKTGDLRMCVDFRKLNKMTMKDNYPLPLIDDLLDRMNEKTVF 802
Query: 181 DEF-L*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
+ L + + V+ + P G Y + RMPFGLKNAP
Sbjct: 803 TKLDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAP 846
Score = 62.5 bits (145), Expect = 8e-10
Identities = 25/65 (38%), Positives = 46/65 (70%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
+KYLG +I+++GI P++ + A+ + P + +++FL CS+FR+FI DF+++A+PL
Sbjct: 913 IKYLGFIINKDGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLH 972
Query: 689 RLTKK 703
+ KK
Sbjct: 973 DILKK 977
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K + FQR +++ + +++ V+ Y DDIL+ +++ HL L+ +F RL KL
Sbjct: 843 KNAPSVFQRFVNKIFA-DMIRENKVVVYMDDILLATENINEHLETLKEIFKRLVENKLEL 901
Query: 477 NRDKCVF 497
DKC F
Sbjct: 902 RIDKCEF 908
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 73.3 bits (172), Expect = 4e-13
Identities = 28/70 (40%), Positives = 51/70 (72%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
++ ++LGH+I+ +GI P+ K++AV++ PK + +++FL C ++RKFIP+FAK+A+P
Sbjct: 394 KETEFLGHIITTDGIKPNPAKIKAVVNFPIPKSTKEIKSFLGLCGFYRKFIPNFAKIAKP 453
Query: 683 LTRLTKKSYV 712
+T KK +
Sbjct: 454 MTLRLKKGSI 463
Score = 60.9 bits (141), Expect = 2e-09
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR ++ + K+ L Y DDI+V S S + H+ LR VF +LR L+
Sbjct: 327 KNAPATFQRCMNNLLADLIYKNC--LVYLDDIIVYSTSLEEHIMSLRKVFLKLREANLKL 384
Query: 477 NRDKCVFAREKSS----IWVT*SLRRVYLRMKTRYARY*I*RSLSVFSTY----ALFFKR 632
DKC F ++++ I T ++ ++K + I +S ++ + K
Sbjct: 385 QLDKCEFLKKETEFLGHIITTDGIKPNPAKIKA-VVNFPIPKSTKEIKSFLGLCGFYRKF 443
Query: 633 VPGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLEQSKAFEIS*EVLTTSPXLVQADYTKPF 812
+P F + + + L + + + AFE ++T+ P L+ D+ K F
Sbjct: 444 IPNFAKIAKPMTLRLK------KGSIINIKDSDYYLAFEKLKVLITSDPILIHPDFKKSF 497
Query: 813 LLRTDSSNYAFG 848
L TD+SN+A G
Sbjct: 498 SLTTDASNFAIG 509
Score = 56.8 bits (131), Expect = 4e-08
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK---ANGG--YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII + S + +P +VPK A+G +R +DYR LN +T D YP+P +DE+L
Sbjct: 222 GIIRKSNSPYCSPVWVVPKKPDASGKSKFRIVIDYRNLNEITVDDKYPIPVMDEILDKLG 281
Query: 169 KRLRDEFL*PSKWLLAVQYQGS--G*NGLCQPFGMYRFKRMPFGLKNAP 309
+ +K +Q + G + + RMPFGLKNAP
Sbjct: 282 NCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGLKNAP 330
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 72.1 bits (169), Expect = 1e-12
Identities = 31/68 (45%), Positives = 49/68 (72%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+V++LG++++ +GI D KVRA+ +M P ++ L+ FL S++RKFI D+AKVA+PL
Sbjct: 323 QVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPL 382
Query: 686 TRLTKKSY 709
T LT+ Y
Sbjct: 383 TNLTRGLY 390
Score = 55.2 bits (127), Expect = 1e-07
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKA---NGG--YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII S +++P +VPK NG YR VD++RLN VT D YP+P I+ L S
Sbjct: 150 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLG 209
Query: 169 KRLRDEFL*PSKWLLAVQYQGSG--*NGLCQPFGMYRFKRMPFGLKNAP 309
L + + + S G Y F R+PFGLKNAP
Sbjct: 210 NAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258
Score = 36.7 bits (81), Expect = 0.045
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K FQR+ID K V Y DDI+V S+ Y H +LR V L L+
Sbjct: 255 KNAPAIFQRMIDDILREHIGKVCYV--YIDDIIVFSEDYDTHWKNLRLVLASLSKANLQV 312
Query: 477 NRDKCVF 497
N +K F
Sbjct: 313 NLEKSHF 319
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 762 VLTTSPXLVQADYTKPFLLRTDSSNYAFG 848
+L +S L +TKPF L TD+SN+A G
Sbjct: 419 ILCSSEILAFPCFTKPFHLTTDASNWAIG 447
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 68.5 bits (160), Expect = 1e-11
Identities = 25/70 (35%), Positives = 48/70 (68%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
++ ++LGH+++ GI P+ +K +A+ + PK + +++FL C ++RKFIP+FAK+ +P
Sbjct: 479 KETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKSFLGLCGFYRKFIPNFAKIVKP 538
Query: 683 LTRLTKKSYV 712
+T KK +
Sbjct: 539 MTLKLKKGAI 548
Score = 65.3 bits (152), Expect = 1e-10
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR ++ KD L Y DDI+V S + H+ L+ VF++LR L+
Sbjct: 412 KNAPATFQRCMNNLLEDLIYKDC--LVYLDDIIVYSTPLEEHILSLKKVFEKLRDANLKL 469
Query: 477 NRDKCVFAREKSS----IWVT*SLRRVYLRMK--TRYARY*I*RSLSVFSTYALFFKR-V 635
DKC F ++++ I T ++ + K T + + + F F+++ +
Sbjct: 470 QLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKSFLGLCGFYRKFI 529
Query: 636 PGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLEQSKAFEIS*EVLTTSPXLVQADYTKPFL 815
P F + + + L + + E ++FE ++T+ P L+ D++KPF
Sbjct: 530 PNFAKIVKPMTLKLK------KGAIIDTKCKEYIESFEKLKVLITSDPILIYPDFSKPFS 583
Query: 816 LRTDSSNYAFG 848
L TD+SN A G
Sbjct: 584 LTTDASNVAIG 594
Score = 62.1 bits (144), Expect = 1e-09
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK---ANGG--YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GI+ + +S + +P +VPK A+G +R VDYR LN +T D +P+PR+DE+L
Sbjct: 307 GIVRKSKSPYCSPIWVVPKKADASGKQKFRLVVDYRNLNEITVNDKFPIPRMDEILDKLG 366
Query: 169 KRLRDEFL*PSKWLLAVQYQGS--G*NGLCQPFGMYRFKRMPFGLKNAP 309
+ + +K +Q + G Y + RMPFGLKNAP
Sbjct: 367 RCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGLKNAP 415
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 66.9 bits (156), Expect = 4e-11
Identities = 29/66 (43%), Positives = 47/66 (71%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
RKV++LG V+S +GI KV+A+ D P+ L+ LR+FL ++R+FIP++AK+A+P
Sbjct: 394 RKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKP 453
Query: 683 LTRLTK 700
L+ L +
Sbjct: 454 LSSLLR 459
Score = 57.2 bits (132), Expect = 3e-08
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKA--NGG---YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII S +++P +VPK + G YR +DYR+LN VT D YP+P I+E+L
Sbjct: 222 GIIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADRYPIPDINEVLAQLG 281
Query: 169 KRLRDEFL*PSKWLLAVQYQGSG*NGLCQPF--GMYRFKRMPFGLKNAP 309
L + + S G Y F R+PFGLKNAP
Sbjct: 282 DNKIFSVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAP 330
Score = 37.9 bits (84), Expect = 0.020
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 12/212 (5%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K + FQR +D K + Y DDI++ S + H +L +F L+ ++
Sbjct: 327 KNAPSIFQRALDDILHEHIGKICFI--YIDDIIIFSKDDETHYQNLDTIFRTLQQANMKC 384
Query: 477 NRDKCVFAREKSSIWVT*SLRRVYLRMKTR---YARY*I*RSLSVFSTY---ALFFKR-V 635
DKC F + K + T+ + + I R+L ++ + +++R +
Sbjct: 385 QLDKCEFMKRKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFI 444
Query: 636 PGFGNLYRTLQR*LNHSHA*LRNRMFGNGVL----EQSKAF-EIS*EVLTTSPXLVQADY 800
P + L + L L + + + E +AF ++ +++ L D+
Sbjct: 445 PNYAKLAKPLSSLLRGEDGRISRTLSSKKSVSLNREAIEAFKKLKSSLVSPDVILHYPDF 504
Query: 801 TKPFLLRTDSSNYAFGCCSNARGXRPMMSLHR 896
K F L TD+SN+A G + RP+ L R
Sbjct: 505 KKEFHLTTDASNFAVGAVLSQEN-RPISFLSR 535
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 66.9 bits (156), Expect = 4e-11
Identities = 29/66 (43%), Positives = 47/66 (71%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
RKV++LG V+S +GI KV+A+ D P+ L+ LR+FL ++R+FIP++AK+A+P
Sbjct: 238 RKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKP 297
Query: 683 LTRLTK 700
L+ L +
Sbjct: 298 LSSLLR 303
Score = 57.2 bits (132), Expect = 3e-08
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKA--NGG---YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII S +++P +VPK + G YR +DYR+LN VT D YP+P I+E+L
Sbjct: 65 GIIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADRYPIPDINEVLAQLG 124
Query: 169 KRLRDEFL*PSKWLLAVQYQGSG*NGLCQPF--GMYRFKRMPFGLKNAP 309
L + + S G Y F R+PFGLKNAP
Sbjct: 125 DNKIFSVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAP 173
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 66.5 bits (155), Expect = 5e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S++G D +KV+A+ + EP C+ +R+FL S++R FI DFA +A P+T
Sbjct: 363 VEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPIT 422
Query: 689 RLTK 700
+ K
Sbjct: 423 DILK 426
Score = 43.2 bits (97), Expect = 5e-04
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S +++PT +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 188 GIIRPSRSPYNSPTWVVDKKGTDASGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 247
Query: 166 KKR--LRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + G Y F R+PFGL+NA
Sbjct: 248 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 296
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 66.5 bits (155), Expect = 5e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S++G D +KV+A+ + EP C+ +R+FL S++R FI DFA +A P+T
Sbjct: 358 VEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPIT 417
Query: 689 RLTK 700
+ K
Sbjct: 418 DILK 421
Score = 43.2 bits (97), Expect = 5e-04
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S +++PT +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 183 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 242
Query: 166 KKR--LRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + G Y F R+PFGL+NA
Sbjct: 243 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 291
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 66.5 bits (155), Expect = 5e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S++G D +KV+A+ + EP C+ +R+FL S++R FI DFA +A P+T
Sbjct: 393 VEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPIT 452
Query: 689 RLTK 700
+ K
Sbjct: 453 DILK 456
Score = 43.2 bits (97), Expect = 5e-04
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S +++PT +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 218 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 277
Query: 166 KKR--LRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + G Y F R+PFGL+NA
Sbjct: 278 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 326
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 66.5 bits (155), Expect = 5e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S++G D +KV+A+ + EP C+ +R+FL S++R FI DFA +A P+T
Sbjct: 358 VEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPIT 417
Query: 689 RLTK 700
+ K
Sbjct: 418 DILK 421
Score = 42.7 bits (96), Expect = 7e-04
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S +++PT +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 183 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANL 242
Query: 166 KKR--LRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + G Y F R+PFGL+NA
Sbjct: 243 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 291
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 66.5 bits (155), Expect = 5e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S++G D +KV+A+ + EP C+ +R+FL S++R FI DFA +A P+T
Sbjct: 358 VEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPIT 417
Query: 689 RLTK 700
+ K
Sbjct: 418 DILK 421
Score = 42.7 bits (96), Expect = 7e-04
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S +++PT +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 183 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANL 242
Query: 166 KKR--LRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + G Y F R+PFGL+NA
Sbjct: 243 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 291
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 66.5 bits (155), Expect = 5e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S++G D +KV+A+ + EP C+ +R+FL S++R FI DFA +A P+T
Sbjct: 811 VEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPIT 870
Query: 689 RLTK 700
+ K
Sbjct: 871 DILK 874
Score = 43.2 bits (97), Expect = 5e-04
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S +++PT +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 636 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 695
Query: 166 KKR--LRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + G Y F R+PFGL+NA
Sbjct: 696 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 744
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 66.1 bits (154), Expect = 6e-11
Identities = 26/67 (38%), Positives = 47/67 (70%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
++ +LGHVI+++GI P+ +K++A+ D P + ++ FL ++RKFIP+F+ +A+P
Sbjct: 368 QETTFLGHVITKDGIKPNPEKIKAIQDYPLPSKPKEIKAFLGITGYYRKFIPNFSDIAKP 427
Query: 683 LTRLTKK 703
LT+ KK
Sbjct: 428 LTKCLKK 434
Score = 64.9 bits (151), Expect = 1e-10
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK---ANGGY--RFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII E S + +P +VPK A+G R +DYR+LN +T D YPMP IDE+L
Sbjct: 196 GIIRESSSPYCSPIWVVPKKLDASGQQKLRIVIDYRKLNEITINDRYPMPNIDEILGKLG 255
Query: 169 KRLRDEFL*PSKWL--LAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
+ + +K + + + +G Y + RMPFGLKNAP
Sbjct: 256 RSNYFTTIDLAKGFHQIEMDSESIAKTAFSTKYGHYEYTRMPFGLKNAP 304
Score = 52.8 bits (121), Expect = 6e-07
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR ++ L + L Y DDI+V S S + HL L AVF++L L+
Sbjct: 301 KNAPATFQRCMNNLLR--PLLNKNCLVYLDDIIVFSTSLEEHLQSLEAVFEKLSQANLKL 358
Query: 477 NRDKCVFAREKSS----IWVT*SLRRVYLRMKT--RYARY*I*RSLSVFSTYALFFKR-V 635
DKC F R++++ + ++ ++K Y + + F ++++ +
Sbjct: 359 QLDKCEFLRQETTFLGHVITKDGIKPNPEKIKAIQDYPLPSKPKEIKAFLGITGYYRKFI 418
Query: 636 PGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLEQSKAFEIS*EVLTTSPXLVQADYTKPFL 815
P F ++ + L + L + E +AF+ +++ P L ++ + F+
Sbjct: 419 PNFSDIAKPLTKCLK------KGVKIDTKHKEYIEAFQKLKLLISEDPILKIPNFERKFV 472
Query: 816 LRTDSSNYAFGCCSNARG 869
L TD+SN A G + G
Sbjct: 473 LTTDASNVALGAVLSQDG 490
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 65.7 bits (153), Expect = 9e-11
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S++G D +KV+A+ + EP C+ +R+FL S++R FI DFA +A P+T
Sbjct: 393 VEYLGFIVSKDGTISDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPIT 452
Query: 689 RLTK 700
+ K
Sbjct: 453 DILK 456
Score = 43.2 bits (97), Expect = 5e-04
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S +++PT +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 218 GIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANL 277
Query: 166 KKR--LRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + G Y F R+PFGL+NA
Sbjct: 278 GKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNA 326
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 64.5 bits (150), Expect = 2e-10
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK---ANGG--YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
G+I E S +++PT +VPK A+G YR +DYR+LN +T D YP+P +DE+L
Sbjct: 233 GLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLG 292
Query: 169 KRLRDEFL*PSKWL--LAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
K + +K + + + G Y + RMPFGL+NAP
Sbjct: 293 KCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341
Score = 60.9 bits (141), Expect = 2e-09
Identities = 24/67 (35%), Positives = 44/67 (65%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
++ +LGH+++ +GI P+ KV+A++ P + +R FL ++RKFIP++A +A+P
Sbjct: 405 KEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKP 464
Query: 683 LTRLTKK 703
+T KK
Sbjct: 465 MTSCLKK 471
Score = 51.6 bits (118), Expect = 1e-06
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
+ TFQR ++ L + L Y DDI++ S S HL+ ++ VF +L L+
Sbjct: 338 RNAPATFQRCMNNILR--PLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKL 395
Query: 477 NRDKCVFAREKSS----IWVT*SLRRVYLRMK--TRYARY*I*RSLSVFSTYALFFKR-V 635
DKC F +++++ I ++ +++K Y + + F ++++ +
Sbjct: 396 QLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFI 455
Query: 636 PGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLEQSKAFEIS*EVLTTSPXLVQADYTKPFL 815
P + ++ + + L + LE +AFE ++ P L D+ K F+
Sbjct: 456 PNYADIAKPMTSCLK------KRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFV 509
Query: 816 LRTDSSNYAFGCCSNARG 869
L TD+SN A G + G
Sbjct: 510 LTTDASNLALGAVLSQNG 527
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 63.3 bits (147), Expect = 5e-10
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPK-----ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKK 171
II S WSAP +VPK N +R +DYR+LN T D YP+P I+++L S K
Sbjct: 344 IIRSSHSPWSAPVWVVPKKLDGTGNRKWRLVIDYRKLNDKTISDRYPIPNINDILDSIGK 403
Query: 172 RLRDEFL*PSKWLLAVQY--QGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + ++ + G Y F RMPFGLKNAP
Sbjct: 404 AKYFSTLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAP 451
Score = 60.9 bits (141), Expect = 2e-09
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 6/190 (3%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR++D L L Y DDI++ S S Q+HL D++ VF++LR +
Sbjct: 448 KNAPATFQRVMDSVLG--DLNGTICLFYLDDIIIFSPSLQKHLLDIKMVFEKLRAANFKL 505
Query: 477 NRDKCVFAREKSSIWVT*SLRRVYLRMKTRYARY*I*RSLSVF--STYALFFKRVPGFGN 650
K F R++ L + + + I ++ F T K G
Sbjct: 506 QPSKSEFLRKEIEF-----LGHIVTQDGVKPNPNKI-SAIKKFPCPTNRRAIKSFLGLLG 559
Query: 651 LYRTLQR*LNHSHA*LRNRMFGNGVLEQSK----AFEIS*EVLTTSPXLVQADYTKPFLL 818
YR R + ++ G + K AFE +L+ P L+ D+ KPF+L
Sbjct: 560 YYRKFIRDFARITKPMTKQLKGKRQVTTDKDFVDAFEQCKTLLSNDPILIHPDFEKPFIL 619
Query: 819 RTDSSNYAFG 848
TD+SN+A G
Sbjct: 620 TTDASNFALG 629
Score = 60.1 bits (139), Expect = 4e-09
Identities = 21/66 (31%), Positives = 46/66 (69%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
+++++LGH+++Q+G+ P+ +K+ A+ P + +++FL ++RKFI DFA++ +P
Sbjct: 515 KEIEFLGHIVTQDGVKPNPNKISAIKKFPCPTNRRAIKSFLGLLGYYRKFIRDFARITKP 574
Query: 683 LTRLTK 700
+T+ K
Sbjct: 575 MTKQLK 580
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 63.3 bits (147), Expect = 5e-10
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPKANGG-----YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKK 171
II+ S WSAP +VPK + +R +D+R+LN T D YP+P I ++L S K
Sbjct: 212 IIKNSHSPWSAPVWVVPKKSDNIGEKKWRLVIDFRKLNEKTVSDRYPIPNIADILDSIGK 271
Query: 172 RLRDEFL*PSKWLLAVQY--QGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
+ + + +Q + + G Y F RMPFGLKNAP
Sbjct: 272 TMYFTTIDLASGFHQIQMNPRDASKTAFTVENGHYEFTRMPFGLKNAP 319
Score = 52.8 bits (121), Expect = 6e-07
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR++D G + +V L Y DDI+V S S Q+H++D+++VF +L+ L+
Sbjct: 316 KNAPATFQRVMDNVL-GDLVGNVC-LVYLDDIIVFSPSLQKHIADIKSVFTKLQNANLKI 373
Query: 477 NRDKCVFAREK 509
KC F R++
Sbjct: 374 QPSKCSFLRKE 384
Score = 31.1 bits (67), Expect = 2.2
Identities = 8/25 (32%), Positives = 20/25 (80%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAV 577
+++ +LGH+++QEG+ P+ K++ +
Sbjct: 383 KEIDFLGHIVTQEGVKPNPLKIQTI 407
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 62.9 bits (146), Expect = 6e-10
Identities = 23/63 (36%), Positives = 45/63 (71%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
R+ ++LGH++SQEG+ P+ +K+ A+ + P + +++FL ++RKFI DFA++ +P
Sbjct: 401 RETEFLGHIVSQEGVRPNPNKIEAIKNFPCPHSKKSIKSFLGLLGYYRKFIRDFARLTQP 460
Query: 683 LTR 691
+T+
Sbjct: 461 MTQ 463
Score = 58.8 bits (136), Expect = 1e-08
Identities = 55/191 (28%), Positives = 76/191 (39%), Gaps = 7/191 (3%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR++D L L Y DDI++ S S Q H L+ +F RLR +
Sbjct: 334 KNAPATFQRVMDNIFG--DLIGTICLVYLDDIIIFSTSLQEHFIHLKTIFGRLRSANFKV 391
Query: 477 NRDKCVFAREKSSIWVT*SLRRVYLRMKTRYARY*I*RSLSVFST--YALFFKRVPGFGN 650
K F R ++ L + + R I ++ F K G
Sbjct: 392 QLTKSYFLRRETEF-----LGHIVSQEGVRPNPNKI-EAIKNFPCPHSKKSIKSFLGLLG 445
Query: 651 LYRTLQR*LNHSHA*LRNRMFGNGVL-----EQSKAFEIS*EVLTTSPXLVQADYTKPFL 815
YR R + ++ GN E KAFE +L+ P L D+TKPF
Sbjct: 446 YYRKFIRDFARLTQPMTQKLRGNNKSIIIDDEFKKAFEYCKTLLSNDPILQYPDFTKPFT 505
Query: 816 LRTDSSNYAFG 848
L TD+SN+A G
Sbjct: 506 LTTDASNFAIG 516
Score = 56.8 bits (131), Expect = 4e-08
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPK-----ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTKK 171
II+ S WSAP +VPK +R +DYR+LN T D YP+P I ++L K
Sbjct: 230 IIKSSYSPWSAPVWVVPKKITPTGEQKWRLVIDYRKLNEKTISDRYPIPNIADILDRLGK 289
Query: 172 RLRDEFL*PSKWLLAVQY--QGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + ++ + G Y F RMPFGLKNAP
Sbjct: 290 AKYFSTLDLASGFHQIEMNPDDTPKTAFTVEGGHYEFIRMPFGLKNAP 337
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 62.9 bits (146), Expect = 6e-10
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +2
Query: 515 YLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLTRL 694
+LGH++S EGI P+ +K+RA+ + P + +++FL ++RKFIP FA++A+PLT
Sbjct: 357 FLGHMVSPEGIRPNPEKLRAIENYPLPTKPKEIKSFLGLTGFYRKFIPHFAQIAKPLTTC 416
Query: 695 TKK 703
KK
Sbjct: 417 LKK 419
Score = 60.1 bits (139), Expect = 4e-09
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK-----ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII E S + +P V+VPK YR +DYR LN +T D YP+P +DE+L
Sbjct: 181 GIIRESNSPYCSPIVVVPKKPDISGQKKYRIAIDYRYLNEITIADKYPIPNMDEILSKLG 240
Query: 169 --KRLRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + + + G Y + RMPFGLKNAP
Sbjct: 241 GCNYFTTIDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRMPFGLKNAP 289
Score = 49.6 bits (113), Expect = 6e-06
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 7/198 (3%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR ++ L + + Y DDI+V S S + HL LRAVF L L+
Sbjct: 286 KNAPATFQRCMNDVLR--PLLNKICMVYLDDIIVFSASLEEHLQSLRAVFQALSNANLKL 343
Query: 477 NRDKCVFAREKSSI---WVT*SLRR---VYLRMKTRYARY*I*RSLSVFSTYALFFKR-V 635
DKC F + + V+ R LR Y + + F F+++ +
Sbjct: 344 QLDKCEFLKHDTYFLGHMVSPEGIRPNPEKLRAIENYPLPTKPKEIKSFLGLTGFYRKFI 403
Query: 636 PGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLEQSKAFEIS*EVLTTSPXLVQADYTKPFL 815
P F + + L L +++ E +AF+ +++ P L D+ K F+
Sbjct: 404 PHFAQIAKPLTTCLK------KDKKVDIKNPEYIEAFKRLKLLISNDPILRSPDFKKKFV 457
Query: 816 LRTDSSNYAFGCCSNARG 869
L TD+SN A G + G
Sbjct: 458 LTTDASNVALGAVLSQDG 475
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 61.3 bits (142), Expect = 2e-09
Identities = 24/68 (35%), Positives = 45/68 (66%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
++ +LGHV++ +GI P+ +K+ A+ P + ++ FL ++RKFIP+FA +A+P
Sbjct: 406 QETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKP 465
Query: 683 LTRLTKKS 706
+T+ KK+
Sbjct: 466 MTKCLKKN 473
Score = 60.1 bits (139), Expect = 4e-09
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK---ANGG--YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII S +++P +VPK A+G +R +DYR+LN +T GD +P+P +DE+L
Sbjct: 234 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 293
Query: 169 KRLRDEFL*PSKWLLAVQY--QGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
+ + +K ++ + G Y + RMPFGLKNAP
Sbjct: 294 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342
Score = 52.8 bits (121), Expect = 6e-07
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K TFQR ++ L + L Y DDI+V S S HL L VF++L L+
Sbjct: 339 KNAPATFQRCMNDILR--PLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKL 396
Query: 477 NRDKCVFAREKSSIW---VT*SLRRVYLRMKTRYARY*I---*RSLSVFSTYALFFKR-V 635
DKC F +++++ +T + +Y I + + F ++++ +
Sbjct: 397 QLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFI 456
Query: 636 PGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLEQSKAFEIS*EVLTTSPXLVQADYTKPFL 815
P F ++ + + + L +N E AF+ +++ P L D+TK F
Sbjct: 457 PNFADIAKPMTKCLK------KNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFT 510
Query: 816 LRTDSSNYAFGCCSNARGXRPMMSLHR 896
L TD+S+ A G + G P+ + R
Sbjct: 511 LTTDASDVALGAVLSQDG-HPLSYISR 536
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 59.3 bits (137), Expect = 7e-09
Identities = 27/71 (38%), Positives = 44/71 (61%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
R++ +LGH+I I P ++K AV P+ ++ ++ FL +FRKFIP +A++A P
Sbjct: 683 RRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPGYAQIARP 742
Query: 683 LTRLTKKSYVW 715
LT L KK ++
Sbjct: 743 LTDLLKKDAIF 753
Score = 54.0 bits (124), Expect = 3e-07
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQ--STKKRLR 180
I+ + S ++ V+V K +G R CVDYR+LN + D +P+P ++E+L+ + K
Sbjct: 516 IVRKSTSNVASRIVVVRKKDGTLRVCVDYRKLNTMVLMDCFPVPIMEEVLEKLQSAKWFT 575
Query: 181 DEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + +AV+ G++ F + PFG KN+P
Sbjct: 576 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSP 618
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 59.3 bits (137), Expect = 7e-09
Identities = 27/71 (38%), Positives = 44/71 (61%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
R++ +LGH+I I P ++K AV P+ ++ ++ FL +FRKFIP +A++A P
Sbjct: 377 RRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPGYAQIARP 436
Query: 683 LTRLTKKSYVW 715
LT L KK ++
Sbjct: 437 LTDLLKKDAIF 447
Score = 54.4 bits (125), Expect = 2e-07
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQ--STKKRLR 180
I+ + S ++ V+V K +G R CVDYR+LN + D +P+P ++E+L+ + K
Sbjct: 210 IVRKSTSNVASRIVVVKKKDGTLRVCVDYRKLNTMVLMDCFPVPIMEEVLEKLQSAKWFT 269
Query: 181 DEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
L + +AV+ G++ F + PFG KN+P
Sbjct: 270 TMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSP 312
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 59.3 bits (137), Expect = 7e-09
Identities = 24/66 (36%), Positives = 43/66 (65%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
+ V +LG +++ G + D +KV+A+ + EPK + +R+FL S++R FI DFA +A P
Sbjct: 358 KSVSFLGFIVTNNGAATDPEKVKAIKEFPEPKNVFEVRSFLGLASYYRCFIKDFASIARP 417
Query: 683 LTRLTK 700
++ + K
Sbjct: 418 ISDILK 423
Score = 44.4 bits (100), Expect = 2e-04
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQS- 162
GII++ +S ++ P +V K N R +D+R+LN T D YPMP I +L +
Sbjct: 185 GIIQKSKSPYNNPIWVVDKKGTDDAGNKKMRLVLDFRKLNERTVPDRYPMPNISMILGNL 244
Query: 163 -TKKRLRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNA 306
K L + + + G Y F+R+PFGL+NA
Sbjct: 245 GKAKYFTTLDLKSGYHQITLAERDREKTAFAVNGGKYEFRRLPFGLRNA 293
Score = 33.1 bits (72), Expect = 0.56
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 12/220 (5%)
Frame = +3
Query: 273 FQAYAIWTKECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDR 452
F+ + A+ FQR ID K V Y DD+++ S+ H+ + V
Sbjct: 283 FRRLPFGLRNAASIFQRTIDDILREQIGKFCYV--YVDDVIIFSEDENDHVKHVDWVLKS 340
Query: 453 LRLFKLRANRDKCVFAREKSSI--WVT*SLRRVYLRMKTRYAR--------Y*I*RSLSV 602
L +R + +K F ++ S ++ + K + + + + L +
Sbjct: 341 LYDANMRISAEKSRFFKKSVSFLGFIVTNNGAATDPEKVKAIKEFPEPKNVFEVRSFLGL 400
Query: 603 FSTYALFFKRVPGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLE-QSKAFEIS*EVLTTSP 779
S Y F K + + N S + R+R E Q +AFE +L +
Sbjct: 401 ASYYRCFIKDFASIARPISDILKGENGSVSRHRSRSIQVEFSEAQQRAFEKLRNILASED 460
Query: 780 XLVQ-ADYTKPFLLRTDSSNYAFGCCSNARGXRPMMSLHR 896
+++ DY K F L TD+S Y G + G RP+ + R
Sbjct: 461 VILRYPDYKKAFDLTTDASAYGIGAVLSQEG-RPITMISR 499
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +2
Query: 503 RKVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEP 682
++V YLGH + +GI PD+ K + P R F+ C+++R+FI +F+ +
Sbjct: 269 KEVTYLGHKCTDKGILPDDTKYEVIEKYPIPTDADSARRFVAFCNYYRRFIKNFSDHSRH 328
Query: 683 LTRLTKKSYVWEWS 724
LTRL KK+ +EW+
Sbjct: 329 LTRLCKKNVQFEWT 342
Score = 51.6 bits (118), Expect = 1e-06
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQ-- 159
GI+E S +++P +LVPK +R VDYR++N D +P+PRI+++L
Sbjct: 96 GIVEPSMSEYNSPLLLVPKKPLPNSTEKRWRLAVDYRQINKKLLSDKFPLPRIEDILDQL 155
Query: 160 STKKRLRDEFL*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
K L + ++ + G YRF R+P+GLK AP
Sbjct: 156 GRAKYFSCLDLMSGFHQIELEKRYRDITSFSTANGSYRFTRLPYGLKVAP 205
Score = 35.9 bits (79), Expect = 0.079
Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 5/189 (2%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K +FQR + SG L+ Y DD++VI S + L +L VF+ R L+
Sbjct: 202 KVAPNSFQRRMTLAFSG--LEPSQAFLYMDDLVVIGCSEKHMLKNLTNVFELCRRHNLKL 259
Query: 477 NRDKCVFAREKSSIWVT*SLRRVYLRMKTRYARY*I*RSLSVFSTYALFFKRVPGFGNLY 656
+ KC F ++ + + L T+Y + + T A +R F N Y
Sbjct: 260 HPGKCSFFMKEVTYLGHKCTDKGILPDDTKYE---VIEKYPI-PTDADSARRFVAFCNYY 315
Query: 657 RT-LQR*LNHSHA*LR----NRMFGNGVLEQSKAFEIS*EVLTTSPXLVQADYTKPFLLR 821
R ++ +HS R N F E + AFE L L D+ K F +
Sbjct: 316 RRFIKNFSDHSRHLTRLCKKNVQF-EWTAECNDAFEYLKTELMKPTLLQYPDFGKEFCIT 374
Query: 822 TDSSNYAFG 848
TD+S A G
Sbjct: 375 TDASKQACG 383
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+V +LGH + +GI PD+ K A+ P R F+ C+++R+FI +FA + +
Sbjct: 409 EVTFLGHKCTDKGILPDDTKYDAIQRYPVPTDADSARRFVAFCNYYRRFIQNFADYSRHI 468
Query: 686 TRLTKKSYVWEWS 724
TRL KK+ +EW+
Sbjct: 469 TRLCKKNVKFEWT 481
Score = 54.0 bits (124), Expect = 3e-07
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPKAN------GGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
I+E S +++P +LVPK + +R +DYR++N D +P+PRID++L
Sbjct: 236 IVEPAVSEYNSPLLLVPKKSLPDSKEKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLG 295
Query: 169 KRLRDEFL*PSKWLLAVQYQGSG*N--GLCQPFGMYRFKRMPFGLKNAP 309
+ L ++ + N G YRF R+P+GLK AP
Sbjct: 296 RAKYFSCLDLMSGFHQIELEEDSRNITSFSTSSGSYRFTRLPYGLKIAP 344
Score = 34.3 bits (75), Expect = 0.24
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K +FQR++ +G L+ Y DD++VI S + +L VF+ R L+
Sbjct: 341 KIAPNSFQRMMTMAFTG--LEPSQAFLYMDDLIVIGCSEKHMTKNLTNVFELCRKNNLKL 398
Query: 477 NRDKCVF 497
+ DKC F
Sbjct: 399 HPDKCSF 405
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 58.4 bits (135), Expect = 1e-08
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+V +LGH + +G+ PD+ K + + P R F+ C+++R+FI +FA + +
Sbjct: 104 EVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSARRFVAFCNYYRRFIRNFADYSRHI 163
Query: 686 TRLTKKSYVWEWS 724
TRL KK+ +EWS
Sbjct: 164 TRLCKKNVPFEWS 176
Score = 35.9 bits (79), Expect = 0.079
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K +FQR++ SG L+ Y DD++VI S + + +L VF+ R + L+
Sbjct: 36 KIAPNSFQRMMTISFSG--LEPSQAFLYMDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKL 93
Query: 477 NRDKCVF 497
+ +KC F
Sbjct: 94 HPEKCSF 100
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 262 GMYRFKRMPFGLKNAP 309
G YRF R+PFGLK AP
Sbjct: 24 GSYRFTRLPFGLKIAP 39
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 58.4 bits (135), Expect = 1e-08
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+V +LGH + +G+ PD+ K + + P R F+ C+++R+FI +FA + +
Sbjct: 104 EVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSARRFVAFCNYYRRFIRNFADYSRHI 163
Query: 686 TRLTKKSYVWEWS 724
TRL KK+ +EWS
Sbjct: 164 TRLCKKNVPFEWS 176
Score = 35.9 bits (79), Expect = 0.079
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K +FQR++ SG L+ Y DD++VI S + + +L VF+ R + L+
Sbjct: 36 KIAPNSFQRMMTISFSG--LEPSQAFLYMDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKL 93
Query: 477 NRDKCVF 497
+ +KC F
Sbjct: 94 HPEKCSF 100
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 262 GMYRFKRMPFGLKNAP 309
G YRF R+PFGLK AP
Sbjct: 24 GSYRFTRLPFGLKIAP 39
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+V +LGH + +GI PD+ K + + P R F+ C+++R+FI +FA + +
Sbjct: 515 EVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHI 574
Query: 686 TRLTKKSYVWEWS 724
TRL KK+ +EW+
Sbjct: 575 TRLCKKNVPFEWT 587
Score = 53.6 bits (123), Expect = 4e-07
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPKANGG------YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
I+E S +++P +LVPK + +R +DYR++N D +P+PRID++L
Sbjct: 342 IVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLG 401
Query: 169 KRLRDEFL*PSKWLLAVQY-QGS-G*NGLCQPFGMYRFKRMPFGLKNAP 309
+ L ++ +GS G YRF R+PFGLK AP
Sbjct: 402 RAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAP 450
Score = 37.1 bits (82), Expect = 0.034
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K +FQR++ SG ++ Y DD++VI S + L +L VF + R + L+
Sbjct: 447 KIAPNSFQRMMTIAFSG--IEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKL 504
Query: 477 NRDKCVF 497
+ +KC F
Sbjct: 505 HPEKCSF 511
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
+V +LGH + +GI PD+ K + + P R F+ C+++R+FI +FA + +
Sbjct: 278 EVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHI 337
Query: 686 TRLTKKSYVWEWS 724
TRL KK+ +EW+
Sbjct: 338 TRLCKKNVPFEWT 350
Score = 53.6 bits (123), Expect = 4e-07
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPKANGG------YRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
I+E S +++P +LVPK + +R +DYR++N D +P+PRID++L
Sbjct: 105 IVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLG 164
Query: 169 KRLRDEFL*PSKWLLAVQY-QGS-G*NGLCQPFGMYRFKRMPFGLKNAP 309
+ L ++ +GS G YRF R+PFGLK AP
Sbjct: 165 RAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAP 213
Score = 37.1 bits (82), Expect = 0.034
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 297 KECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFKLRA 476
K +FQR++ SG ++ Y DD++VI S + L +L VF + R + L+
Sbjct: 210 KIAPNSFQRMMTIAFSG--IEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKL 267
Query: 477 NRDKCVF 497
+ +KC F
Sbjct: 268 HPEKCSF 274
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 58.0 bits (134), Expect = 2e-08
Identities = 21/67 (31%), Positives = 44/67 (65%)
Frame = +2
Query: 506 KVKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPL 685
++++LGH I+ EG+ P + K+ A+ + P + +++FL + R++I D++K+A+PL
Sbjct: 332 EIEFLGHTINSEGLKPSQKKIDAICKINLPTNQKQIKSFLGITGYLRRYIKDYSKIAQPL 391
Query: 686 TRLTKKS 706
+ KK+
Sbjct: 392 IKYLKKN 398
Score = 51.2 bits (117), Expect = 2e-06
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPKA-----NGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQSTK 168
GII +S +++P +V K +R VDYR+LN T D +P+P IDE+
Sbjct: 159 GIIRHSKSPYNSPLWVVQKKMDQSNKQKWRLVVDYRKLNKETIEDRFPIPNIDEIFDKLG 218
Query: 169 KRLRDEFL*PSKWLLAVQYQGSG*N--GLCQPFGMYRFKRMPFGLKNAP 309
L +K ++ + G Y F RMPFGL+NAP
Sbjct: 219 DCKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAP 267
Score = 45.6 bits (103), Expect = 1e-04
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +3
Query: 252 STVRYVSFQAYAIWTKECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSD 431
+T + F + +TFQRL++ S + + V Y DDIL+ S + H++
Sbjct: 249 TTSGHYEFLRMPFGLRNAPSTFQRLMNNILSPYTGQFCIV--YMDDILIFSKNIGEHVNH 306
Query: 432 LRAVFDRLRLFKLRANRDKCVFAREK 509
L +F L L+ DKC FARE+
Sbjct: 307 LSCIFSCLSKANLKLQSDKCEFAREE 332
Score = 34.3 bits (75), Expect = 0.24
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 738 KAFEIS*EVLTTSPXLVQADYTKPFLLRTDSSNYAFG 848
+AF+ ++T+ P +V D+ K F + TD+SNYA G
Sbjct: 410 EAFQKLKILITSDPIVVYPDFNKQFTIVTDASNYALG 446
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 56.4 bits (130), Expect = 5e-08
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG ++S GI+ KV A+ +P L +R+FL S++R FI DFA +A PLT
Sbjct: 389 VEYLGFMVSSGGITTSPSKVEAIQKYNQPTNLFSVRSFLGLASYYRCFIKDFASIARPLT 448
Query: 689 RLTK 700
+ K
Sbjct: 449 DILK 452
Score = 43.6 bits (98), Expect = 4e-04
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 15/215 (6%)
Frame = +3
Query: 297 KECATTFQRLID---RFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDLRAVFDRLRLFK 467
K + FQR ID R R G S Y DD+++ S+ + H++D+ V DRL
Sbjct: 320 KNAPSIFQRAIDDVVRDRIGKSC-----YVYVDDVIIFSNGIEDHVNDVAWVLDRLSGAN 374
Query: 468 LRANRDKCVFAREK--------SSIWVT*SLRRVYLRMKTRYAR--Y*I*RSLSVFSTYA 617
+R +++K F +E SS +T S +V K + + L + S Y
Sbjct: 375 MRVSKEKSFFFKESVEYLGFMVSSGGITTSPSKVEAIQKYNQPTNLFSVRSFLGLASYYR 434
Query: 618 LFFKRVPGFGNLYRTLQR*LNHSHA*LRNRMFGNGVLE-QSKAFEIS*EVLTT-SPXLVQ 791
F K + + N + +++ E Q AFE VL + + L+
Sbjct: 435 CFIKDFASIARPLTDILKGENGKVSASQSKKIPISFDERQCSAFEKLKNVLVSENVMLLY 494
Query: 792 ADYTKPFLLRTDSSNYAFGCCSNARGXRPMMSLHR 896
DY K F L TD+S + G + G +P+ + R
Sbjct: 495 PDYRKAFDLTTDASAFGLGAVLSQDG-KPVTMISR 528
Score = 43.2 bits (97), Expect = 5e-04
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = +1
Query: 4 GIIEECESAWSAPTVLVPK------ANGGYRFCVDYRRLNAVTKGDAYPMPRIDELLQST 165
GII S ++ P +V K N R +D+R+LN T D YP+P + +L +
Sbjct: 214 GIIRPSSSPYNNPVWVVDKKGTDEEGNTKKRLVIDFRKLNLKTIDDKYPIPNVVWILSNL 273
Query: 166 -KKRLRDEF-L*PSKWLLAVQYQGSG*NGLCQPFGMYRFKRMPFGLKNAP 309
K R L + + + + G Y F R+PFGLKNAP
Sbjct: 274 GKARFFTTLDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAP 323
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +2
Query: 509 VKYLGHVISQEGISPDEDKVRAVLDMKEPKCLQHLRTFLQTCSWFRKFIPDFAKVAEPLT 688
V+YLG+ + I P+ K+ ++ + P+ + +R F+ S+FRKF+ F+++ +PL
Sbjct: 642 VQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSGVRQFIGLASYFRKFVSGFSQLMKPLY 701
Query: 689 RLTKKSYVWEWS 724
L+ S WS
Sbjct: 702 SLSSGSGKITWS 713
Score = 46.8 bits (106), Expect = 4e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 7 IIEECESAWSAPTVLVPKANGGYRFCVDYRRLNAVTKGDAYPMPRIDE 150
I+ S +++P +LV K NG R CVD+R LN+ T D YP+P I +
Sbjct: 485 IVRPSCSPFASPMLLVKKKNGTDRLCVDFRELNSNTISDKYPLPLISD 532
Score = 33.1 bits (72), Expect = 0.56
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +3
Query: 255 TVRYVSFQAYAIWTKECATTFQRLIDRFRSGSSLKDVTVLAYFDDILVISDSYQRHLSDL 434
+V Y +F + K + FQR + + L + V+ Y DDI+V+S + + L L
Sbjct: 561 SVEYTAFVPDGL--KNAPSVFQRTV--INALGDLANSFVIVYMDDIMVVSPTKELALERL 616
Query: 435 RAVFDRLRLFKLRANRDKCVFAR 503
+ V + L N KC F +
Sbjct: 617 KTVLNVLTKAGFTFNLAKCSFLK 639
>AY113484-1|AAM29489.1| 558|Drosophila melanogaster RE45347p
protein.
Length = 558
Score = 32.7 bits (71), Expect = 0.73
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 411 YQRHLS-DLRAVFDRLRLFKLRANRDKCVFAREKSS 515
Y RH+S +LR FD L N D+CV AR+K S
Sbjct: 418 YLRHVSPELRMHFDELSATGTLRNEDRCVHARQKDS 453
>AE014297-4260|AAF56810.2| 558|Drosophila melanogaster CG10000-PA
protein.
Length = 558
Score = 32.7 bits (71), Expect = 0.73
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 411 YQRHLS-DLRAVFDRLRLFKLRANRDKCVFAREKSS 515
Y RH+S +LR FD L N D+CV AR+K S
Sbjct: 418 YLRHVSPELRMHFDELSATGTLRNEDRCVHARQKDS 453
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,865,474
Number of Sequences: 53049
Number of extensions: 822922
Number of successful extensions: 2084
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2063
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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