Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0628
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    26   0.45 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.5  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   7.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.6  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 101 KQDQWAPQEVKVNPEHQELRVLRD 172
           KQD W   E K +PEH  ++   D
Sbjct: 96  KQDWWKQLEAKYDPEHTYVKAHED 119


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 234 IRWKCRTVGPRGEKGEDGLSIIGPKGNSG 320
           ++ K +T+G +G+ G+D  SI    G +G
Sbjct: 57  MKHKRQTLGKQGDDGDDKDSITSDGGKNG 85


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 234 IRWKCRTVGPRGEKGEDGLSIIGPKGNSG 320
           ++ K +T+G +G+ G+D  SI    G +G
Sbjct: 5   MKHKRQTLGKQGDDGDDKDSITSDGGKNG 33


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 234 IRWKCRTVGPRGEKGEDGLSIIGPKGNSG 320
           ++ K +T+G +G+ G+D  SI    G +G
Sbjct: 188 MKHKRQTLGKQGDDGDDKDSITSDGGKNG 216


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 525 LQRPPIYPWVQYFQANRR 472
           L  PP++P+  YF+   R
Sbjct: 331 LSNPPLWPYTMYFRMPHR 348


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = -2

Query: 631 PVXPIGPIGPLSPRGPTAPSLPTVSLWTGRSGGALIAATSYLPL 500
           P  P     P+S  G T+P+       T     A +A+ +  PL
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPL 55


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 358 KEVIPVLEAYQEIPPLVHLVFQEK*VFPEKR 450
           ++ +P +  +QE+PP      +E  +F E+R
Sbjct: 8   EKFLPTVLPHQEVPPPFGYYHEEPPLFYEER 38


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 528 SLQRPPIYPWVQYFQ 484
           SL R PI+P+  YF+
Sbjct: 322 SLGRVPIWPYTLYFR 336


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 528 SLQRPPIYPWVQYFQ 484
           SL R PI+P+  YF+
Sbjct: 329 SLGRVPIWPYTLYFR 343


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 360 FLLFDPYLRKNQVSHYF 310
           +LLFD ++++NQ   Y+
Sbjct: 146 YLLFDYFVQRNQEYKYY 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,378
Number of Sequences: 336
Number of extensions: 4922
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)