Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0628
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    27   0.23 
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    27   0.23 
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    27   0.23 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   0.69 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   8.5  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 163 PAGHKGEKGE-AGFDGQKGESGPRGYDGNVGP*DLEE 270
           P G +G +G+ A FD +  +  P G+ G  G   LEE
Sbjct: 89  PMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEE 125


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 163 PAGHKGEKGE-AGFDGQKGESGPRGYDGNVGP*DLEE 270
           P G +G +G+ A FD +  +  P G+ G  G   LEE
Sbjct: 89  PMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEE 125


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 163 PAGHKGEKGE-AGFDGQKGESGPRGYDGNVGP*DLEE 270
           P G +G +G+ A FD +  +  P G+ G  G   LEE
Sbjct: 89  PMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEE 125


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.69
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 586 PTAPSLPTVSLWTGRSGGAL 527
           PT PS+P  S   G +GGAL
Sbjct: 52  PTPPSVPVGSAVAGTAGGAL 71


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 691 RSPSAPGAPGKPCMPSAHRSPVXPIGPIGPLSPRGP 584
           + PS+ GAPG    PS H+SP  P     P   +GP
Sbjct: 14  QQPSS-GAPGP--QPSPHQSPQAPQRGSPPNPSQGP 46



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 685 PSAPGAPGKPCMPSAHRSPVXPIGPIGPLSPRGPTAPSL 569
           P + GAP  P    ++ S + P+  +    P  PT PS+
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLPNMPGSMPTMPTMPSM 448


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 659 LAWCTWSTG 685
           + WCTWS G
Sbjct: 386 IRWCTWSEG 394


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 659 LAWCTWSTG 685
           + WCTWS G
Sbjct: 386 IRWCTWSEG 394


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 659 LAWCTWSTG 685
           + WCTWS G
Sbjct: 386 IRWCTWSEG 394


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 15/52 (28%), Positives = 18/52 (34%)
 Frame = -2

Query: 739 HQXLYLQVDQLVHLLPRSPSAPGAPGKPCMPSAHRSPVXPIGPIGPLSPRGP 584
           H   + Q   L HL  R P          + S + S      P  P  PRGP
Sbjct: 351 HHHHHHQTQSLQHLHYRQPPTLSESYSSYVNSMYASGAQFATPCTPSPPRGP 402


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -2

Query: 745 RWHQXLYLQVDQL-VHLLPRSPSAPGAPGKPCMPSAHRSPVXP 620
           R H   +LQ   L +   PR    PG+ G    P +HR    P
Sbjct: 36  RSHLDKFLQCASLKLAFEPRRNPGPGSKGPRDFPRSHRFKSLP 78


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 301 PIMDRPSSPFSPLGPTVRHFHRIHEAQT 218
           P   RP + F P     RH+ R  E ++
Sbjct: 157 PRYKRPRTTFEPRATDSRHYDRYKEEES 184


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 694 PRSPSAPGAPGKPCMPSAHRSPVXPIGPIGPL 599
           PRSP+A  +P + C  +   +   P G  G L
Sbjct: 738 PRSPNASPSPAEQCASTTTITARSPQGSQGLL 769


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 648 GMHGLPGAPGALG 686
           G+H L G PG LG
Sbjct: 330 GVHNLHGMPGILG 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,072
Number of Sequences: 438
Number of extensions: 6015
Number of successful extensions: 47
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)