Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0627
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.9  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 329 TCLWQNAVTHKKHDNKEDK 273
           TC W+++V + K  NKE K
Sbjct: 87  TCDWKDSVKNCKLKNKERK 105


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 495 ITQCIRHPGSXFILH 539
           +TQC  HPG  F  H
Sbjct: 152 VTQCPIHPGMTFRYH 166


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 638 LISQGWWRHLCCRCLWVP 585
           LIS GWW +      ++P
Sbjct: 19  LISVGWWENFVSETSYLP 36


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 638 LISQGWWRHLCCRCLWVP 585
           LIS GWW +      ++P
Sbjct: 252 LISVGWWENFVSETSYLP 269


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 638 LISQGWWRHLCCRCLWVP 585
           LIS GWW +      ++P
Sbjct: 252 LISVGWWENFVSETSYLP 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,379
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)