Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0627
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118595-1|AAM49964.1|  647|Drosophila melanogaster LD47639p pro...    40   0.003
AE013599-2163|AAF58074.2|  647|Drosophila melanogaster CG8399-PA...    40   0.003
AY113534-1|AAM29539.1|  159|Drosophila melanogaster RE60882p pro...    33   0.30 
AY071565-1|AAL49187.1|  159|Drosophila melanogaster RE63144p pro...    33   0.30 
AE014134-2485|AAF53387.1|  159|Drosophila melanogaster CG7532-PA...    33   0.30 

>AY118595-1|AAM49964.1|  647|Drosophila melanogaster LD47639p
           protein.
          Length = 647

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -3

Query: 246 PQGLTGEVVFRATIVKTLKVFWVGVQSAPIKIV 148
           P    G+VVF ATI ++   FWVGV S P++IV
Sbjct: 148 PVDFLGQVVFNATIAQSYNEFWVGVPSQPVQIV 180


>AE013599-2163|AAF58074.2|  647|Drosophila melanogaster CG8399-PA
           protein.
          Length = 647

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -3

Query: 246 PQGLTGEVVFRATIVKTLKVFWVGVQSAPIKIV 148
           P    G+VVF ATI ++   FWVGV S P++IV
Sbjct: 148 PVDFLGQVVFNATIAQSYNEFWVGVPSQPVQIV 180


>AY113534-1|AAM29539.1|  159|Drosophila melanogaster RE60882p
           protein.
          Length = 159

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -3

Query: 249 PPQGLTGEVVFRATIVKTLKVFWVG 175
           PP G  G V F AT+V+T  V+WVG
Sbjct: 126 PPAGYKGNVKFMATVVQTGFVYWVG 150


>AY071565-1|AAL49187.1|  159|Drosophila melanogaster RE63144p
           protein.
          Length = 159

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -3

Query: 249 PPQGLTGEVVFRATIVKTLKVFWVG 175
           PP G  G V F AT+V+T  V+WVG
Sbjct: 126 PPAGYKGNVKFMATVVQTGFVYWVG 150


>AE014134-2485|AAF53387.1|  159|Drosophila melanogaster CG7532-PA
           protein.
          Length = 159

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -3

Query: 249 PPQGLTGEVVFRATIVKTLKVFWVG 175
           PP G  G V F AT+V+T  V+WVG
Sbjct: 126 PPAGYKGNVKFMATVVQTGFVYWVG 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,465,939
Number of Sequences: 53049
Number of extensions: 628960
Number of successful extensions: 1225
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)