Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0626
(377 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 43 0.002
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 40 0.015
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 40 0.020
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 39 0.027
UniRef50_Q4EC81 Cluster: Pol protein; n=2; Wolbachia endosymbion... 39 0.027
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 39 0.027
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 37 0.14
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 35 0.44
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 34 0.76
UniRef50_O46180 Cluster: Non-LTR retrotransposon reverse transcr... 34 0.76
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 33 1.3
UniRef50_UPI0000E49710 Cluster: PREDICTED: similar to endonuclea... 32 4.1
UniRef50_Q6II19 Cluster: HDC20041; n=1; Drosophila melanogaster|... 32 4.1
UniRef50_Q6SZN7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_Q49892 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_UPI000155468D Cluster: PREDICTED: hypothetical protein;... 31 7.1
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 31 9.4
UniRef50_A6LGF4 Cluster: Putative outer membrane protein, probab... 31 9.4
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 43.2 bits (97), Expect = 0.002
Identities = 30/117 (25%), Positives = 47/117 (40%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P LY+++ +D+PT + E DV +A +A D+A S AA S +
Sbjct: 647 VLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAF 706
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
V +N K A + G + + +YLG+ +DR L
Sbjct: 707 QQWAENWNVRINAEKCANVTFAN--RTGSCPGVSLNGRLIRHHQAYKYLGITLDRKL 761
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 39.9 bits (89), Expect = 0.015
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL+P LY +YT+D+P LAL+A D+A A+S P R+
Sbjct: 248 VLSPTLYNIYTHDVPK--------HPKTDLALYADDTAIIATSRSPQLITQRL----QEH 295
Query: 196 XXXXXXXXVAVNVGKTAAXLXV-RSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+N+ KT A L R A + + +E+ ++Y+G+ +D SL
Sbjct: 296 TDSLINYYAKINLNKTQAILFTKRRASQHQNILINNQA--IEWIKQIKYMGLTLDTSL 351
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 39.5 bits (88), Expect = 0.020
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL+P+L++L+ NDIP +LALFA D+ + SS S S++
Sbjct: 658 VLSPLLFSLFINDIPR--------SPPTQLALFADDTTVYYSSRNKSLIASKLQSAALTL 709
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXR---------GVNVEFRPSVRYLGV 348
+ +N K+ A L R R G+ + + V+YLGV
Sbjct: 710 GQWFRKWRIDINPAKSTAVLFQRGNSPLISSRIRRRNITPPITLFGLPIPWARKVKYLGV 769
Query: 349 NIDRSL 366
+D S+
Sbjct: 770 TLDASM 775
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 39.1 bits (87), Expect = 0.027
Identities = 30/117 (25%), Positives = 49/117 (41%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL+P+LY+++T+DIP + LA++A D+A S P A +
Sbjct: 1121 VLSPLLYSIFTHDIPKTD--------RTTLAIYADDTAILTRSKQPYMATRYLQESVECI 1172
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ VN K+ A L R ++ + V+YLGV +D+ L
Sbjct: 1173 ENWCRRWLINVNPDKSRALLLARRRVSPDGFVRMF-NADIPWSDQVKYLGVILDKKL 1228
>UniRef50_Q4EC81 Cluster: Pol protein; n=2; Wolbachia endosymbiont
of Drosophila ananassae|Rep: Pol protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 242
Score = 39.1 bits (87), Expect = 0.027
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Frame = +1
Query: 1 GIRH-EVLAPVLYALYTND------IPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSA 159
G+ H +L P+LY++YT+D +P + N + LA +A D+A S P
Sbjct: 79 GVPHGSILGPILYSIYTSDMPLPDAVPIISRNCTLTPTKLLLATYADDTAVLMSHKQPKE 138
Query: 160 AISRMXXXXXXXXXXXXXXXVAVNVGKTA--AXLXVRSAQEXXXXXXXXRGVNVEFRPSV 333
+ + NV K A + ++ + G +
Sbjct: 139 HAKHLQAYLNVISEWANKWRMTFNVKKCAHVSFFSGQNMTQTNQTKLLLNGQIIPHANKY 198
Query: 334 RYLGVNIDRSLRMT 375
+YLGV +DR + M+
Sbjct: 199 KYLGVTLDRKINMS 212
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 39.1 bits (87), Expect = 0.027
Identities = 29/117 (24%), Positives = 44/117 (37%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P+LY+++T D+P A LA +A D A SSN + A +
Sbjct: 646 VLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTL 705
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ VN KT GV ++ +YLG+ +D+ L
Sbjct: 706 AAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRL 762
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 36.7 bits (81), Expect = 0.14
Identities = 31/117 (26%), Positives = 47/117 (40%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P+LY LYT D P ++ NL + FA D+A + S P A + +
Sbjct: 641 VLGPILYTLYTADFP-IDYNLTT-------STFADDTAILSRSKCPIKATALLSRHLTSV 692
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+++NV K + Q + + V YLGV++DR L
Sbjct: 693 ERWLADWRISINVQKCKQVTFTLNKQ--TCPPLVLNNICIPQADEVTYLGVHLDRRL 747
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 35.1 bits (77), Expect = 0.44
Identities = 29/117 (24%), Positives = 48/117 (41%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL+P+LY+++T+DI + LA++A D+A S P A +
Sbjct: 212 VLSPLLYSIFTHDIHKTD--------RTTLAIYADDTAILTRSKQPYMATRYLQESVERI 263
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ VN K+ A L R ++ + V+YLGV +D+ L
Sbjct: 264 ENWCCRWLINVNPDKSRALLLARRIVSPDGFVRMF-NADIPWSDHVKYLGVILDKKL 319
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 34.3 bits (75), Expect = 0.76
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-----TLEGNLQAWE---ADVKLALFAXDSAYFASSNFPSAAISR 171
+L PVLY++Y++D+P N+ + ++ LA +A D+ + S + AI+
Sbjct: 694 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 753
Query: 172 MXXXXXXXXXXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGV 348
+A+N KT L ++ Q G RYLG+
Sbjct: 754 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGL 813
Query: 349 NIDRSL 366
+DR L
Sbjct: 814 MLDRRL 819
>UniRef50_O46180 Cluster: Non-LTR retrotransposon reverse
transcriptase; n=2; Drosophila subobscura|Rep: Non-LTR
retrotransposon reverse transcriptase - Drosophila
subobscura (Fruit fly)
Length = 467
Score = 34.3 bits (75), Expect = 0.76
Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 1/118 (0%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXX 192
VL+P+L+ + N I LEG K+ +A D A S FP M
Sbjct: 275 VLSPLLWNIAVNKILCDLEGE------GCKVVAYADDVAIIFSGKFPQTLCELMTAKLAR 328
Query: 193 XXXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ +N KT L + G + F S YLG+ ID+ L
Sbjct: 329 LSEWTKSRGLGINPSKTELVLFTTKYKIPSLNPPILNGCRLSFSDSASYLGLVIDKKL 386
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 33.5 bits (73), Expect = 1.3
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 704 LGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFS 763
Query: 199 XXXXXXXVAVNVGKTA-AXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT +++ +G ++ YLGV +D L ++
Sbjct: 764 DWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDSKLTLS 823
>UniRef50_UPI0000E49710 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 773
Score = 31.9 bits (69), Expect = 4.1
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFA 138
VL P L+ LY NDIP + N E++VK LFA D+ F+
Sbjct: 460 VLGPTLFLLYVNDIPDIICNT---ESEVK--LFADDTKIFS 495
>UniRef50_Q6II19 Cluster: HDC20041; n=1; Drosophila
melanogaster|Rep: HDC20041 - Drosophila melanogaster
(Fruit fly)
Length = 120
Score = 31.9 bits (69), Expect = 4.1
Identities = 23/96 (23%), Positives = 40/96 (41%)
Frame = +1
Query: 79 QAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXXXXXXXXXVAVNVGKTAAXLX 258
+A A + LA +A D+A AS + A + + + +N K+A
Sbjct: 11 EACTAQLLLATYADDTAMLASHSSLQIASNGVQFRLPAIKRWTSKWNITINCTKSACVHL 70
Query: 259 VRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ + G ++F S YLGV++DR+L
Sbjct: 71 PFTMRPQTCLGLFFEGNTIDFVSSYCYLGVHLDRTL 106
>UniRef50_Q6SZN7 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus fascians|Rep: Putative uncharacterized
protein - Rhodococcus fascians
Length = 139
Score = 31.5 bits (68), Expect = 5.4
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 20 WHQS--STLSTPTTFP-RLRATSKRGKPT*SWRCLXXTAPTSRPLISPL--RPFRGCRGC 184
WH S + P P RLR +R T +WRC + TS+ SPL RP + RG
Sbjct: 15 WHSSIQGAATRPIGSPQRLRWCRRRAASTCNWRCAMPSGITSKRWRSPLRWRPGQRPRGL 74
Query: 185 WTYC 196
C
Sbjct: 75 TMRC 78
>UniRef50_Q49892 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium leprae|Rep: Putative uncharacterized
protein - Mycobacterium leprae
Length = 91
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 115 QTAPTSRRLPTLGGCPQAWECRWCRERRGLVPGPRA 8
++AP+ +P LGG P++W C C +PG A
Sbjct: 41 RSAPSITSMPNLGGSPRSWVCTTCSV--AAIPGSTA 74
>UniRef50_UPI000155468D Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 318
Score = 31.1 bits (67), Expect = 7.1
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 29 SSTLSTPTT-FPRLRATSKRGKPT*SWRCLXXTAPTSRPLISPLRPFRGCRGCW 187
SS S P+ FP RA+ +PT W L PTS PL+ PF RG W
Sbjct: 260 SSLSSAPSARFPEQRASVLDQEPTGQWPPLQQ--PTSDPLLVANTPFGYKRGGW 311
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 30.7 bits (66), Expect = 9.4
Identities = 26/116 (22%), Positives = 46/116 (39%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L+P L+ LY DIP EG + A++A D A ++ S + +
Sbjct: 978 LSPTLFNLYGYDIPQREG--------IITAIYADDIAVLRTTRQISQCTNLLNKHLVTLI 1029
Query: 199 XXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+++N K+ + +G +++ S +YLGV +DR L
Sbjct: 1030 DWYSHWRLSINESKSV-DIFFSKRNTTPHTCIQIKGHTLKWSNSAKYLGVTLDRKL 1084
>UniRef50_A6LGF4 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Parabacteroides
distasonis ATCC 8503|Rep: Putative outer membrane
protein, probably involved in nutrient binding -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 1017
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 46 TNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSA 159
TND P+ +G+++AW + F D +YF N A
Sbjct: 904 TNDYPSAKGSVKAWNIANFNSFFVEDGSYFRIQNIQLA 941
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,727,271
Number of Sequences: 1657284
Number of extensions: 4630689
Number of successful extensions: 13144
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13136
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -