Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0626
         (377 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   3.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.1  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   5.4  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   7.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   9.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   9.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 33  LRSLHQRHSHA*GQPPSVGS 92
           LRS HQ+ SH  G+    GS
Sbjct: 789 LRSYHQQQSHHYGRRERSGS 808


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +1

Query: 7   RHEVLAPVLYALYTNDIPTLEGNLQAW 87
           RHEV  P   A   N  P    + Q W
Sbjct: 338 RHEVTRPAAPANRGNGFPKRSSDEQQW 364


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +3

Query: 21  GTSPLRSLHQRHSHA*GQPP 80
           G SP  S    H H   +PP
Sbjct: 44  GMSPYASSQHHHHHLQARPP 63


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 37  ALYTNDIPTLEGNLQAWEADVKL 105
           A+Y+N +P    N  +WE+ +++
Sbjct: 89  AIYSNLLPRPGSNDNSWESLIEV 111


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 20  WHQSSTLSTPTTFPRLRATSKRG 88
           WH + + S P   P+L   +K G
Sbjct: 251 WHITDSQSFPLELPQLPNMTKFG 273


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/31 (25%), Positives = 11/31 (35%)
 Frame = +2

Query: 266 PHKSRPXXXXXXXELMXSLGPVSDTWESIST 358
           PH   P           + GP   TW ++ T
Sbjct: 282 PHVYNPPDHIQQATPYSAPGPTYSTWSTVQT 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,318
Number of Sequences: 336
Number of extensions: 1002
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)