Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0626
         (377 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0147 + 26997641-26997688,26997783-26997857,26997966-269980...    27   4.9  
02_01_0497 + 3607227-3607462,3607600-3607661,3608138-3608286,360...    27   6.5  

>01_06_0147 +
           26997641-26997688,26997783-26997857,26997966-26998052,
           26998566-26998622,26998867-26998959,26999528-26999600,
           26999830-26999905,27000217-27000280,27000951-27000980,
           27001251-27001367,27002742-27002782,27002870-27003176,
           27003279-27003368,27003479-27003541,27003678-27003752,
           27003922-27003984,27004714-27004784,27004885-27005068
          Length = 537

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 57  NVVGVESVEDWCQDL 13
           +  GVE VE WCQDL
Sbjct: 234 SATGVEKVEVWCQDL 248


>02_01_0497 +
           3607227-3607462,3607600-3607661,3608138-3608286,
           3608418-3608538,3608638-3608793,3609041-3609086,
           3609414-3609480,3609553-3609629,3610180-3610249,
           3610956-3611014,3611105-3611213,3611552-3611611,
           3611701-3611763,3612007-3612131,3612260-3612422,
           3612506-3612565,3612802-3612860,3613057-3613138,
           3613227-3613290,3613506-3613573,3613648-3613758
          Length = 668

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 1   GIRHEVLAPVLYALYTNDIPTLEGNLQAWEA 93
           G+   +LA  LY +   DIP  +G+   WEA
Sbjct: 624 GVTACILALGLYRIGKQDIPVYDGSWTEWEA 654


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,989,802
Number of Sequences: 37544
Number of extensions: 137332
Number of successful extensions: 354
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)