Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0626
(377 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6954| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.10
SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_50273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 29 0.95
SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047) 29 1.7
SB_7055| Best HMM Match : RVT_1 (HMM E-Value=0.00051) 29 1.7
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_5465| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_42093| Best HMM Match : RVT_1 (HMM E-Value=2.5e-20) 28 2.9
SB_40417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1) 28 2.9
SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_28572| Best HMM Match : RVT_1 (HMM E-Value=2e-20) 28 2.9
SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12) 28 2.9
SB_1758| Best HMM Match : RVT_1 (HMM E-Value=0) 28 2.9
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20) 28 2.9
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_35242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_26221| Best HMM Match : RVT_1 (HMM E-Value=1.6e-24) 28 2.9
SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0) 28 2.9
SB_11516| Best HMM Match : Lectin_C (HMM E-Value=2.9) 28 2.9
SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_27764| Best HMM Match : RVT_1 (HMM E-Value=3.99931e-42) 27 3.8
SB_24072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0) 27 5.1
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 5.1
SB_35764| Best HMM Match : RVT_1 (HMM E-Value=8.1e-13) 27 5.1
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 27 5.1
SB_19328| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 27 5.1
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 27 5.1
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 27 5.1
SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0) 27 5.1
SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11) 27 5.1
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 27 5.1
SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32) 27 5.1
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 27 5.1
SB_18871| Best HMM Match : RVT_1 (HMM E-Value=0) 27 5.1
SB_51005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_33611| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_31085| Best HMM Match : RVT_1 (HMM E-Value=0.0094) 27 6.7
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_14910| Best HMM Match : RVT_1 (HMM E-Value=0.47) 27 6.7
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 27 6.7
SB_6196| Best HMM Match : rve (HMM E-Value=3.7e-12) 27 6.7
SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_53800| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_28157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_20131| Best HMM Match : RVT_1 (HMM E-Value=0.0049) 27 6.7
SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 26 8.8
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 26 8.8
SB_37732| Best HMM Match : RVT_1 (HMM E-Value=2e-23) 26 8.8
SB_27893| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
>SB_6954| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 943
Score = 32.7 bits (71), Expect = 0.10
Identities = 28/118 (23%), Positives = 51/118 (43%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
+L P+L+ +Y ND+P L + L+LFA D+ + + + PS A+ ++
Sbjct: 306 LLGPLLFLVYINDLPAL------LDPGTSLSLFADDTKCYRTISSPSDAV-KLQSDLDVL 358
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLR 369
+ N+ K A L V + G ++ P+ + LGV + R L+
Sbjct: 359 SEWSRAWKLRYNIDKCEA-LRVTRKRSPIETNYSIDGHILKLTPAQKDLGVVVARDLK 415
>SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1462
Score = 31.1 bits (67), Expect = 0.31
Identities = 27/118 (22%), Positives = 50/118 (42%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
+L P+L+ +Y ND+P L + L+LFA D+ + + + PS A+ ++
Sbjct: 715 LLGPLLFLVYINDLPAL------LDPGTSLSLFADDTKCYRTISSPSDAV-KLQSDLDVL 767
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLR 369
+ N+ K L V + G ++ P+ + LGV + R L+
Sbjct: 768 SEWSRAWKLRYNIDK-CEVLRVTRKRSPIETNYSIDGHILKLTPAQKDLGVVVARDLK 824
>SB_50273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.7 bits (66), Expect = 0.41
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAI 165
+L P+L+ +Y ND+P L + L+LFA D+ + + + PS A+
Sbjct: 184 LLGPLLFLVYINDLPAL------LDPGTSLSLFADDTKCYRTISSPSDAV 227
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 29.5 bits (63), Expect = 0.95
Identities = 26/117 (22%), Positives = 49/117 (41%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P+L+ Y ND+P + QA +L A D+A + ++ P+ ++
Sbjct: 279 VLGPLLFLAYINDLPLCLKHTQA-------SLLADDTAIYCEASSPADLQDKLNSDLNHL 331
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ +N+ K + + V +Q G+ E +YLG+ I+ +L
Sbjct: 332 TPWLDANRLTLNI-KKSKIMIVGGSQAKLILTINGSGLGRE--TCYKYLGIVINETL 385
>SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047)
Length = 660
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDS 126
+L P+L+ LY ND+P + NL K+A FA D+
Sbjct: 493 LLGPILFLLYANDLPDVVHNL-------KVACFADDT 522
>SB_7055| Best HMM Match : RVT_1 (HMM E-Value=0.00051)
Length = 198
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAIS 168
+L P+L+ +Y NDIP + +AL+A DS + S + S++ S
Sbjct: 100 ILGPLLFLVYANDIPNYV------QQGSNIALYADDSKLYRSIDTASSSTS 144
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL+PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 677 VLSPVLFLLFINDISTSIQSNLRLFADDCVL 707
>SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 73 NLQAWEADVKLALFAXDSAYFASSNFPSAAI 165
N Q W+ DV LAL A SA + ++ + A +
Sbjct: 947 NQQTWDRDVPLALLAYRSAVYEATGYTPACM 977
>SB_5465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 810
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 1 GIRH-EVLAPVLYALYTNDIPT-LEGNLQAWEADVKLAL 111
G+ H V+ P+L+ LY ND+P + G ++ + D L L
Sbjct: 696 GVPHGSVVGPLLFLLYINDLPDGINGKIRLFADDCALYL 734
>SB_42093| Best HMM Match : RVT_1 (HMM E-Value=2.5e-20)
Length = 325
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 121 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 151
>SB_40417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 121 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 151
>SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1)
Length = 311
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 37 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 67
>SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 435 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 465
>SB_28572| Best HMM Match : RVT_1 (HMM E-Value=2e-20)
Length = 388
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 121 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 151
>SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)
Length = 769
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 565 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 595
>SB_1758| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 359
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 234 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 264
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 17 SWHQSSTLSTPTTFPRLRATSKRGKPT*SWRCLXXTAPTS 136
SW Q LS+PTT + +KR K T SWR L P S
Sbjct: 1189 SWSQCGLLSSPTT----TSPAKRRK-TPSWRTLAPALPPS 1223
>SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20)
Length = 838
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFP 153
VL PVL+ L+ ND+PT L++ + LFA DS + N P
Sbjct: 310 VLGPVLFLLFINDMPT---GLKS-----HVRLFADDSVLYRPINSP 347
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 13 EVLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
+VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 527 DVLGPLLFLLYVNDLPDNLKSSIRLFADDALL 558
>SB_35242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 37 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 67
>SB_26221| Best HMM Match : RVT_1 (HMM E-Value=1.6e-24)
Length = 488
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAI 165
+L P+ + +Y ND+P L + L+LFA D+ + + + PS A+
Sbjct: 249 LLCPLHFLVYINDLPAL------LDPGTSLSLFADDTKCYRTISSPSDAV 292
>SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 801
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 535 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 565
>SB_11516| Best HMM Match : Lectin_C (HMM E-Value=2.9)
Length = 267
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 63 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 93
>SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
VL PVL+ L+ NDI T ++ NL+ + D L
Sbjct: 332 VLGPVLFLLFINDISTSIQSNLRLFADDCVL 362
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAIS 168
+L P+L+ +Y ND+P + +AL+A DS + S + S++ S
Sbjct: 485 ILGPLLFLVYANDMPNYV------QQGSNIALYADDSKLYRSIDTASSSTS 529
>SB_27764| Best HMM Match : RVT_1 (HMM E-Value=3.99931e-42)
Length = 715
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAIS 168
+L P+L+ +Y ND+P + +AL+A DS + S + S++ S
Sbjct: 628 ILGPLLFLVYANDMPNYV------QQGSNIALYADDSKLYRSIDTASSSTS 672
>SB_24072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAIS 168
+L P+L+ +Y ND+P + +AL+A DS + S + S++ S
Sbjct: 622 ILGPLLFLVYANDMPNYV------QQGSNIALYADDSKLYRSIDTASSSTS 666
>SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1273
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 773 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 803
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 101 SWRCLXXTAPTSRPLISPLRPFRGCRGC 184
S RC P LI P R GC+GC
Sbjct: 536 STRCCWTCVPCPAGLIKPSRGQDGCKGC 563
>SB_35764| Best HMM Match : RVT_1 (HMM E-Value=8.1e-13)
Length = 362
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAA 162
+L P+L+ LY ND+P + N K+A FA D+ N S A
Sbjct: 193 LLGPILFLLYANDLPDVVHN-------SKVACFADDTKLVNGVNSDSDA 234
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 79 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 109
>SB_19328| Best HMM Match : RVT_1 (HMM E-Value=2e-36)
Length = 295
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 175 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 205
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 65 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 95
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 311 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 341
>SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 864
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 495 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 525
>SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11)
Length = 461
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 73 NLQAWEADVKLALFAXDSAYFASSNFPSAAI 165
N Q W+ DV LAL A SA ++++ A +
Sbjct: 283 NQQTWDRDVPLALLAYRSAVHEATSYTPACM 313
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 285 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 315
>SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32)
Length = 1241
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 651 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 681
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 370 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 400
>SB_18871| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 546
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 303 VLGPLLFLLYVNDLPDNLKSSIRLFADDALL 333
>SB_51005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKLAL 111
V+ P+L+ LY ND+P + G ++ + D L L
Sbjct: 7 VVGPLLFLLYINDLPDGINGKIRLFADDCALYL 39
>SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 304 GVNVEFRPSVRYLGVNIDRSLR 369
GV ++F ++YLGV I R LR
Sbjct: 737 GVALDFVEEIKYLGVTITRDLR 758
>SB_33611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT 63
VL PVL+ L+ ND+PT
Sbjct: 243 VLGPVLFLLFINDMPT 258
>SB_31085| Best HMM Match : RVT_1 (HMM E-Value=0.0094)
Length = 270
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 304 GVNVEFRPSVRYLGVNIDRSLR 369
GV ++F ++YLGV I R LR
Sbjct: 186 GVALDFVEEIKYLGVTITRDLR 207
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 29 SSTLSTPTTFPRLRATSKR 85
SST PTTFPRL T+ R
Sbjct: 80 SSTPEYPTTFPRLEQTTPR 98
>SB_14910| Best HMM Match : RVT_1 (HMM E-Value=0.47)
Length = 193
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGN 75
+L P+L+ LY ND+P + N
Sbjct: 97 LLGPILFCLYANDLPDVVHN 116
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 304 GVNVEFRPSVRYLGVNIDRSLR 369
GV ++F ++YLGV I R LR
Sbjct: 29 GVALDFVEEIKYLGVTITRDLR 50
>SB_6196| Best HMM Match : rve (HMM E-Value=3.7e-12)
Length = 444
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 73 NLQAWEADVKLALFAXDSAYFASSNFPSAAI 165
N Q W+ DV LAL A SA ++ + A +
Sbjct: 218 NQQTWDRDVPLALLAYRSAVHEATGYTPACM 248
>SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 304 GVNVEFRPSVRYLGVNIDRSLR 369
GV ++F ++YLGV I R LR
Sbjct: 702 GVALDFVEKIKYLGVTITRGLR 723
>SB_53800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAI 165
+L P+L+ L+ ND+P VK+ L+A D+ S++ + +I
Sbjct: 622 ILGPLLFVLFINDLP-----FHISSPKVKIDLYADDTTISVSTDVNNTSI 666
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 304 GVNVEFRPSVRYLGVNIDRSLR 369
GV ++F ++YLGV I R LR
Sbjct: 29 GVALDFVEEIKYLGVTITRDLR 50
>SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1868
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSN 147
L P+L+ +Y ND+P L +FA D+ FASS+
Sbjct: 1526 LGPLLFLIYINDLPHSSDKL-------SFKIFADDTNVFASSS 1561
>SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-TLEGNLQAWEADVKL 105
VL P+L+ LY ND+P L+ +++ + D L
Sbjct: 487 VLGPLLFLLYMNDLPDNLKSSIRLFADDALL 517
>SB_28157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKLAL 111
V+ P+L+ LY ND+P + G ++ + D L L
Sbjct: 494 VVGPLLFLLYINDLPDGINGKIRLFADDCALYL 526
>SB_20131| Best HMM Match : RVT_1 (HMM E-Value=0.0049)
Length = 186
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKLAL 111
V+ P+L+ LY ND+P + G ++ + D L L
Sbjct: 93 VVGPLLFLLYINDLPDGINGKIRLFADDCALYL 125
>SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 761
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 304 GVNVEFRPSVRYLGVNIDRSLR 369
GV ++F ++YLGV I R LR
Sbjct: 543 GVVLDFVEEIKYLGVTITRDLR 564
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKL 105
V+ P+L+ L+ ND+P + GN++ + D L
Sbjct: 1542 VVGPLLFLLFINDLPEGITGNIRLFADDCTL 1572
>SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 26.2 bits (55), Expect = 8.8
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRM 174
+L PV+++LY N T E L ++ L +S F S + AISRM
Sbjct: 173 LLQPVMFSLYGNQYETREEYLLLSMFELALKYEFAESENFNSLLRANTAISRM 225
>SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2209
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAA 162
+L P+++ LY ND+P + N K+A FA D+ N S A
Sbjct: 1703 LLGPIIFLLYANDLPDVVHN-------SKVACFADDTKLVKCVNSDSDA 1744
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 377 AVILKLRSILTPRYRTLGLNSTLTPRRLSWXWDDSCAD 264
A+ KL SIL + G + T R++S WDD+C +
Sbjct: 1293 ALATKLNSILALSCPS-GQETCTTGRKISIDWDDTCRE 1329
>SB_37732| Best HMM Match : RVT_1 (HMM E-Value=2e-23)
Length = 951
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPT-LEGNLQAWEADVKLAL 111
V+ P+L+ LY ND+P + G ++ + D L L
Sbjct: 658 VVGPLLFLLYINDLPDGINGKIRFFADDCALYL 690
>SB_27893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 26.2 bits (55), Expect = 8.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGN 75
+L P+L+ LY ND+P + N
Sbjct: 32 LLGPILFLLYANDLPDVVHN 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,979,135
Number of Sequences: 59808
Number of extensions: 142235
Number of successful extensions: 588
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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