Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0626
         (377 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF131810-1|AAD20050.1|  196|Homo sapiens Unknown protein.              29   3.8  
U12569-1|AAB60354.1|  392|Homo sapiens mu opioid receptor varian...    29   6.6  

>AF131810-1|AAD20050.1|  196|Homo sapiens Unknown protein.
          Length = 196

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 100 SRRLPTLGGCPQAWECRWC 44
           SRRL +L GC  AW   WC
Sbjct: 177 SRRLSSLDGCSSAWWPSWC 195


>U12569-1|AAB60354.1|  392|Homo sapiens mu opioid receptor variant
           protein.
          Length = 392

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -1

Query: 377 AVILKLRSILTPRYRTLGLNSTLTPRRLSWXWDDSCADRTXXIAAVFPTLTATL 216
           A+ L +  I T +YR   ++ TLT    +W W++         A + P L  T+
Sbjct: 199 AIGLPVMFIATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITV 252


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,583,341
Number of Sequences: 237096
Number of extensions: 777029
Number of successful extensions: 2027
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2027
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)