Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0626
(377 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 43 1e-04
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 43 1e-04
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 39 0.002
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 37 0.010
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 37 0.010
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 36 0.013
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 34 0.053
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 34 0.053
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 34 0.053
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 34 0.053
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 33 0.092
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 32 0.21
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 31 0.37
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 31 0.49
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 31 0.49
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 31 0.49
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 31 0.49
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 31 0.49
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 29 2.6
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/117 (25%), Positives = 47/117 (40%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P LY+++ +D+PT + E DV +A +A D+A S AA S +
Sbjct: 647 VLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAF 706
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
V +N K A + G + + +YLG+ +DR L
Sbjct: 707 QQWAENWNVRINAEKCANVTFAN--RTGSCPGVSLNGRLIRHHQAYKYLGITLDRKL 761
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/117 (25%), Positives = 47/117 (40%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P LY+++ +D+PT + E DV +A +A D+A S AA S +
Sbjct: 449 VLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAF 508
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
V +N K A + G + + +YLG+ +DR L
Sbjct: 509 QQWAENWNVRINAEKCANVTFAN--RTGSCPGVSLNGRLIRHHQAYKYLGITLDRKL 563
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/117 (24%), Positives = 44/117 (37%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P+LY+++T D+P A LA +A D A SSN + A +
Sbjct: 646 VLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTL 705
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ VN KT GV ++ +YLG+ +D+ L
Sbjct: 706 AAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRL 762
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 36.7 bits (81), Expect = 0.010
Identities = 31/117 (26%), Positives = 47/117 (40%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P+LY LYT D P ++ NL + FA D+A + S P A + +
Sbjct: 641 VLGPILYTLYTADFP-IDYNLTT-------STFADDTAILSRSKCPIKATALLSRHLTSV 692
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+++NV K + Q + + V YLGV++DR L
Sbjct: 693 ERWLADWRISINVQKCKQVTFTLNKQ--TCPPLVLNNICIPQADEVTYLGVHLDRRL 747
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 36.7 bits (81), Expect = 0.010
Identities = 31/117 (26%), Positives = 47/117 (40%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P+LY LYT D P ++ NL + FA D+A + S P A + +
Sbjct: 641 VLGPILYTLYTADFP-IDYNLTT-------STFADDTAILSRSKCPIKATALLSRHLTSV 692
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+++NV K + Q + + V YLGV++DR L
Sbjct: 693 ERWLADWRISINVQKCKQVTFTLNKQ--TCPPLVLNNICIPQADEVTYLGVHLDRRL 747
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 36.3 bits (80), Expect = 0.013
Identities = 30/117 (25%), Positives = 47/117 (40%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXX 195
VL P LY +YT DIPT + + ++ FA D+A + S P A +++
Sbjct: 643 VLGPTLYLIYTADIPT--------NSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDI 694
Query: 196 XXXXXXXXVAVNVGKTAAXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSL 366
+ VN K + Q+ + + V YLGV++DR L
Sbjct: 695 KKWLSDWRIKVNEQKCKHVTFTLNRQD--CPPLLLNSIPLPKADEVTYLGVHLDRRL 749
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 34.3 bits (75), Expect = 0.053
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-----TLEGNLQAWE---ADVKLALFAXDSAYFASSNFPSAAISR 171
+L PVLY++Y++D+P N+ + ++ LA +A D+ + S + AI+
Sbjct: 247 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 306
Query: 172 MXXXXXXXXXXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGV 348
+A+N KT L ++ Q G RYLG+
Sbjct: 307 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGL 366
Query: 349 NIDRSL 366
+DR L
Sbjct: 367 MLDRRL 372
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.3 bits (75), Expect = 0.053
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-----TLEGNLQAWE---ADVKLALFAXDSAYFASSNFPSAAISR 171
+L PVLY++Y++D+P N+ + ++ LA +A D+ + S + AI+
Sbjct: 694 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 753
Query: 172 MXXXXXXXXXXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGV 348
+A+N KT L ++ Q G RYLG+
Sbjct: 754 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGL 813
Query: 349 NIDRSL 366
+DR L
Sbjct: 814 MLDRRL 819
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.3 bits (75), Expect = 0.053
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-----TLEGNLQAWE---ADVKLALFAXDSAYFASSNFPSAAISR 171
+L PVLY++Y++D+P N+ + ++ LA +A D+ + S + AI+
Sbjct: 694 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 753
Query: 172 MXXXXXXXXXXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGV 348
+A+N KT L ++ Q G RYLG+
Sbjct: 754 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGL 813
Query: 349 NIDRSL 366
+DR L
Sbjct: 814 MLDRRL 819
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.3 bits (75), Expect = 0.053
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Frame = +1
Query: 16 VLAPVLYALYTNDIP-----TLEGNLQAWE---ADVKLALFAXDSAYFASSNFPSAAISR 171
+L PVLY++Y++D+P N+ + ++ LA +A D+ + S + AI+
Sbjct: 694 ILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINL 753
Query: 172 MXXXXXXXXXXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGV 348
+A+N KT L ++ Q G RYLG+
Sbjct: 754 NQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGL 813
Query: 349 NIDRSL 366
+DR L
Sbjct: 814 MLDRRL 819
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 33.5 bits (73), Expect = 0.092
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 704 LGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFS 763
Query: 199 XXXXXXXVAVNVGKTA-AXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT +++ +G ++ YLGV +D L ++
Sbjct: 764 DWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDSKLTLS 823
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 32.3 bits (70), Expect = 0.21
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 692 LGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFS 751
Query: 199 XXXXXXXVAVNVGKTA-AXLXVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT +++ +G ++ YLGV +D L ++
Sbjct: 752 DWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDSKLTLS 811
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +1
Query: 16 VLAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFP 153
VL P+LY LYT DIPT N Q + + FA D+A + S P
Sbjct: 182 VLGPILYTLYTADIPT---NYQ-----LTIFTFADDTAIISRSRCP 219
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 576 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 635
Query: 199 XXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT + +++ +G ++ YLGV +D L ++
Sbjct: 636 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 695
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 751
Query: 199 XXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT + +++ +G ++ YLGV +D L ++
Sbjct: 752 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 811
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 751
Query: 199 XXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT + +++ +G ++ YLGV +D L ++
Sbjct: 752 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 811
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 654 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 713
Query: 199 XXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT + +++ +G ++ YLGV +D L ++
Sbjct: 714 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 773
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 19 LAPVLYALYTNDIPTLEGNLQAWEADVKLALFAXDSAYFASSNFPSAAISRMXXXXXXXX 198
L P+LY+++++D+P + + L+ +A D+ +S +AA
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 751
Query: 199 XXXXXXXVAVNVGKTAAXL-XVRSAQEXXXXXXXXRGVNVEFRPSVRYLGVNIDRSLRMT 375
++VN KT + +++ +G ++ YLGV +D L ++
Sbjct: 752 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 811
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 14 RSWHQSSTLSTPTTFPRLRATSKRGKPT*SWRCLXXTAPTSRP 142
RS ++ST + TT PR T+ +PT + T TSRP
Sbjct: 993 RSTTKTSTCAPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRP 1035
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 14 RSWHQSSTLSTPTTFPRLRATSKRGKPT*SWRCLXXTAPTSRP 142
RS ++ST + TT PR T+ +PT + T TSRP
Sbjct: 1073 RSTTKTSTCAPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTSRP 1115
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 14 RSWHQSSTLSTPTTFPRLRATSKRGKPT*SWRCLXXTAPTSRP 142
RS ++ST + TT PR T +PT + T TSRP
Sbjct: 353 RSTTKTSTCAPTTTTPRPTTTPSTSRPTTTTPRSTTTTSTSRP 395
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 14 RSWHQSSTLSTPTTFPRLRATSKRGKPT*SWRCLXXTAPTSRP 142
RS + T S TT PR T+ +PT + T TSRP
Sbjct: 545 RSTTTTCTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRP 587
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,377,590
Number of Sequences: 53049
Number of extensions: 214693
Number of successful extensions: 583
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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