Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0625
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical...    31   1.1  
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    28   6.1  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    28   6.1  

>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = -2

Query: 426 RIFTLASFLILVINIQCIIYASNLLISYIYNLYVC--GLMALVILLKPDFCV*NEFNCQY 253
           + FT++    +  N++ +     L+IS I  + VC  G++AL++ + P F      NC Y
Sbjct: 233 KFFTISQRFQVKENLRALRVGRRLVISVIVTVVVCGVGIIALILEVVPPFLCHFVENCIY 292

Query: 252 F-LFVLC 235
              F++C
Sbjct: 293 LNPFLIC 299


>AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.3 protein.
          Length = 252

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/83 (20%), Positives = 43/83 (51%)
 Frame = -2

Query: 537 YVFFYLGPLTFLSLCFA*STTMVTRSSLLNIKSS*AARIFTLASFLILVINIQCIIYASN 358
           YV +    + F+++ +A +  ++ R++ L    S   ++  +  FL +VIN +C+    +
Sbjct: 9   YVLYSFFLVYFIAVAYAFNIILMFRNNELAGYISNITQLSMIVPFLWVVINKECLKVQQS 68

Query: 357 LLISYIYNLYVCGLMALVILLKP 289
           +   Y + +++ G +  + +L P
Sbjct: 69  IENFYWHRIFIAGAVVCLNILLP 91


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 657 IPXA--TNYAYLYNSQGLGK*KKGWLSRWIKKTTKMGN*NLNYVFFYLGPLTFL 502
           IP A  T  AYLYNS G G     WLS              N+++F+ GP  F+
Sbjct: 660 IPPAIITLVAYLYNSDGFGTPDHCWLST-----------QNNFIWFFAGPACFI 702


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 657 IPXA--TNYAYLYNSQGLGK*KKGWLSRWIKKTTKMGN*NLNYVFFYLGPLTFL 502
           IP A  T  AYLYNS G G     WLS              N+++F+ GP  F+
Sbjct: 662 IPPAIITLVAYLYNSDGFGTPDHCWLST-----------QNNFIWFFAGPACFI 704


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 657 IPXA--TNYAYLYNSQGLGK*KKGWLSRWIKKTTKMGN*NLNYVFFYLGPLTFL 502
           IP A  T  AYLYNS G G     WLS              N+++F+ GP  F+
Sbjct: 660 IPPAIITLVAYLYNSDGFGTPDHCWLST-----------QNNFIWFFAGPACFI 702


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 657 IPXA--TNYAYLYNSQGLGK*KKGWLSRWIKKTTKMGN*NLNYVFFYLGPLTFL 502
           IP A  T  AYLYNS G G     WLS              N+++F+ GP  F+
Sbjct: 662 IPPAIITLVAYLYNSDGFGTPDHCWLST-----------QNNFIWFFAGPACFI 704


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,961,889
Number of Sequences: 27780
Number of extensions: 289590
Number of successful extensions: 599
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)