Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0625
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     25   0.99 
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   3.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   4.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.2  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = -2

Query: 357 LLISYIYNLYVCGLMALVILLK 292
           LLI+YIY+LY+ GL++  I+L+
Sbjct: 121 LLIAYIYHLYM-GLLSGGIILR 141


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -3

Query: 275 KMSLIANTFCLYSAFCTLVYSYFS-IFICF*KWDNLNEYIYRNDHTCLLRTVIEIVTITF 99
           +  L+AN    YSA  TL ++ +S + + F    ++  ++ +    C+L  V+    ++F
Sbjct: 178 QFDLVANPTANYSASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLS--WVSF 235

Query: 98  YFN 90
           + N
Sbjct: 236 WLN 238


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 662 CILDKIQLFKGFSDW 706
           C+L   ++FK  SDW
Sbjct: 485 CVLKNTEIFKDKSDW 499


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 424 YFHACFVFNTSNKYSMYY 371
           YF   F++N  N+ SM Y
Sbjct: 669 YFKDVFIYNRPNEESMNY 686


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 424 YFHACFVFNTSNKYSMYY 371
           YF   F++N  N+ SM Y
Sbjct: 669 YFKDVFIYNRPNEESMNY 686


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 164 YIYRNDHTCLLRTVIEIVTITFY 96
           Y  R DH  +L  ++  V +T+Y
Sbjct: 369 YPGRADHMIMLEMILPGVAVTYY 391


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,507
Number of Sequences: 438
Number of extensions: 3876
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)