Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0624
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499FC0 Cluster: zinc finger protein; n=1; Entamo...    36   0.88 
UniRef50_Q7YN56 Cluster: ORF-G; n=37; Apicomplexa|Rep: ORF-G - E...    34   2.7  
UniRef50_Q3LVV9 Cluster: Cell division control protein; n=1; Big...    34   3.6  
UniRef50_Q22H22 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  
UniRef50_Q4A5Z4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  

>UniRef50_UPI0000499FC0 Cluster: zinc finger protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: zinc finger protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 198

 Score = 35.9 bits (79), Expect = 0.88
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
 Frame = -3

Query: 566 VIF*TLTVRINCLTYLLYEFMSISNECSLYSFN-*FGNYSKV--------TMVIKLQINS 414
           V+F  +T  +NC+ +LL++F  +  EC L S    FGN S +        T+V +LQ N 
Sbjct: 105 VLFTVITTGLNCIIFLLFQFKKLHIECRLISLGFLFGNISILFEFYQNLKTIVYQLQFNF 164

Query: 413 TYS 405
           T S
Sbjct: 165 TCS 167


>UniRef50_Q7YN56 Cluster: ORF-G; n=37; Apicomplexa|Rep: ORF-G -
           Eimeria tenella
          Length = 478

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 303 LLIIGAFCK--FYIKS*IFNTNVKYYSKFIEIFK*QKYTYTHRETNLL 166
           +L IG++ K   Y KS   N ++  Y   ++IFK  KYTY + E N L
Sbjct: 345 MLHIGSYTKSHVYSKSISLNKSIYAYRGLVKIFKNAKYTYNYTECNSL 392


>UniRef50_Q3LVV9 Cluster: Cell division control protein; n=1;
           Bigelowiella natans|Rep: Cell division control protein -
           Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 571

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
 Frame = +1

Query: 199 LLLLKYFDKFAVVFYVSIKNLTFNVKLTESSNN**Q*YENQRFNLLKYLPKINKNINAIL 378
           LL+  YF   + +   ++  +TFN  ++  +    +  E ++ N      K+N  I +I 
Sbjct: 350 LLIEYYFLLLSSLNLTNLLKVTFNRLMSLLNTFKSELEEIKKINEYMQFLKLNNEIFSIN 409

Query: 379 IFGTSQNGPE*VLLICNLITIVTLE*FPNQLKE*REHSLLIDINSYNKYVR---QLIRTV 549
           ++ T+ N    V   C    ++       Q+K  +  +LL  + ++N Y     +++ ++
Sbjct: 410 LYDTTMNTVNSVYYYCEKYFVMI------QIK--KITTLLCTLQNFNPYFCRCFEILNSI 461

Query: 550 RV*N-----ITAIIRLYRRNVEENXRQFNDIMILFAXKKNHL 660
           ++ N     I  +IR+ + ++ E    F+ ++ +FA  KNHL
Sbjct: 462 KLINSDEKLIIKLIRIKKASIYEKFLLFHKLLEIFALSKNHL 503


>UniRef50_Q22H22 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 715

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +1

Query: 70  KPIYLNMYGIRDDKRNQLQKNP*KLMSTNYLSKEICFAMRVRILLLLKYFDKFAVVFYVS 249
           K  YL+  G+ ++ + Q+ +     +    L K+I F  +    LL K  D+FA +FYV 
Sbjct: 595 KKEYLHSIGLNNETKLQIDQQVDYSLDYQKLFKDIIFLKKAVASLLTK--DQFAALFYVG 652

Query: 250 IKNLTFNVKLTES 288
           + +  +  KL ++
Sbjct: 653 LSDTFWKKKLNKN 665


>UniRef50_Q4A5Z4 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma synoviae 53|Rep: Putative uncharacterized
           protein - Mycoplasma synoviae (strain 53)
          Length = 824

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
 Frame = +1

Query: 166 KEICFAMRVRILLLLKYFDKFAVVFY---VSIKNLTFNVKLTESSNN**Q*YENQRFNL 333
           KE C    VR +++L  +D   ++FY    ++KN+ FN+ L+ES N+    YEN  + +
Sbjct: 761 KEYC-ENDVRAMMML--YDFLMLLFYKIDANLKNIEFNISLSESQNDFLYKYENDGYQI 816


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,150,266
Number of Sequences: 1657284
Number of extensions: 10195909
Number of successful extensions: 18500
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18498
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)