Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0624
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.98 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.98 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.98 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.98 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 104 SLMPYMFK*IGFYLA*LYVHIDRKNVISPINYL 6
           S + YM+  +G  L  L + +DRK VI+   YL
Sbjct: 699 SQVMYMYYLLGHRLMELPISVDRKAVIAENTYL 731



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 376 LIFGTSQNGPE*VLLICN 429
           L+F TSQ  P+ V + CN
Sbjct: 93  LLFMTSQLKPDKVTVFCN 110


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 104 SLMPYMFK*IGFYLA*LYVHIDRKNVISPINYL 6
           S + YM+  +G  L  L + +DRK VI+   YL
Sbjct: 699 SQVMYMYYLLGHRLMELPISVDRKAVIAENTYL 731



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 376 LIFGTSQNGPE*VLLICN 429
           L+F TSQ  P+ V + CN
Sbjct: 93  LLFMTSQLKPDKVTVFCN 110


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 104 SLMPYMFK*IGFYLA*LYVHIDRKNVISPINYL 6
           S + YM+  +G  L  L + +DRK VI+   YL
Sbjct: 699 SQVMYMYYLLGHRLMELPISVDRKAVIAENTYL 731



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 376 LIFGTSQNGPE*VLLICN 429
           L+F TSQ  P+ V + CN
Sbjct: 93  LLFMTSQLKPDKVTVFCN 110


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 104 SLMPYMFK*IGFYLA*LYVHIDRKNVISPINYL 6
           S + YM+  +G  L  L + +DRK VI+   YL
Sbjct: 699 SQVMYMYYLLGHRLMELPISVDRKAVIAENTYL 731



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 376 LIFGTSQNGPE*VLLICN 429
           L+F TSQ  P+ V + CN
Sbjct: 93  LLFMTSQLKPDKVTVFCN 110


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 449 KVTMVIKLQINSTYSGPFCDVPKINIALIFLFIFGKYFSKLNL 321
           K  +V  + I ST+S  F DV  +  +  F+F   +  +K+ +
Sbjct: 87  KAILVHAITIRSTFSWTFIDVFIMLTSTAFVFRLKQLNAKVEM 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,526
Number of Sequences: 336
Number of extensions: 3135
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)