Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0622
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.57 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   7.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.4  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +2

Query: 263 IMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKI 439
           ++N +D L   +ETL   +   R+       A+ T NLE    IQ   +    GH+  I
Sbjct: 454 VVNYIDDLLVASETLNEHLEHLRQVFEKLKQARMTINLEKSNFIQKEVK--FLGHILTI 510


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 410 VGCASVCDRSAPGSRWPGPATCRMPLFSHL 321
           V    V   +  G R PGPA  R  L +HL
Sbjct: 316 VAAVQVPQLAGGGRRGPGPARSRRHLPAHL 345


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 322 RCEKSGMRHVAGPGHLEPGADRSHTD 399
           RC KSG++ +  P  L    D+   D
Sbjct: 56  RCTKSGLKQITCPSGLAFDIDKQTCD 81


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 358 PGHLEPGADRSHTDAHPTNLARSSREDLRHA 450
           P H  P +D+ H   H T +  ++  D   A
Sbjct: 32  PRHFNPPSDKLHHPIHQTVIYHNNPRDPNRA 62


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1

Query: 370 EPGADRSHTDAHPTNLARSSREDLRHALG 456
           +P  D SH   H T+L         H LG
Sbjct: 126 QPPTDNSHVHHHQTSLLGKVEGAATHHLG 154


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +2

Query: 269 NELDSLRQEAETLKNAIR 322
           +++ +LRQE ETLK+ ++
Sbjct: 344 DKIVALRQEQETLKSQVQ 361


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 610 GLDNICSIYSLKTRXGNVRVXRELPG 687
           GL+ +  + SLK +  NV++   + G
Sbjct: 77  GLEELAHLMSLKEKNPNVKILLSMGG 102


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 610 GLDNICSIYSLKTRXGNVRVXRELPG 687
           GL+ +  + SLK +  NV++   + G
Sbjct: 77  GLEELAHLMSLKEKNPNVKILLSMGG 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,923
Number of Sequences: 336
Number of extensions: 3746
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)