Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0622
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0621 - 26198985-26199020,26199539-26199652,26200260-262006... 69 6e-12
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 36 0.031
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 36 0.031
04_04_0475 + 25500470-25500609,25500697-25500794,25502806-255029... 34 0.17
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 34 0.17
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 33 0.29
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 33 0.29
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924... 31 1.2
03_06_0753 + 36015026-36015256,36015780-36015885,36016132-360161... 31 1.2
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 30 2.0
11_06_0627 + 25633537-25633884,25635246-25635869 30 2.7
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 30 2.7
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 30 2.7
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 29 3.6
02_05_1194 - 34881450-34881593,34882023-34882220,34882522-348826... 29 3.6
07_03_0971 + 23038409-23039134,23040321-23040611 29 4.7
01_07_0350 + 42941976-42942401,42942510-42942737,42943201-429433... 29 4.7
03_05_0378 - 23619169-23619225,23619389-23619454,23620052-236202... 29 6.2
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 28 8.2
>03_05_0621 -
26198985-26199020,26199539-26199652,26200260-26200623,
26201232-26201527
Length = 269
Score = 68.5 bits (160), Expect = 6e-12
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Frame = +1
Query: 565 MTCAYAPSGSYVACGGLDNICSIYSLKT---RXGNVRVXRELPGHSGYLFLLP-LSSTTT 732
MTCA+AP+G VACGGLD+ CSI++L + R GN+ V R L GH GY+ + T
Sbjct: 1 MTCAFAPNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQET 60
Query: 733 RF*PASGDMXCAL 771
R +SGD C L
Sbjct: 61 RLITSSGDQTCVL 73
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 36.3 bits (80), Expect = 0.031
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 419 RGHLAKIYAMHWGSDSRNLVSASQDGKLIV 508
RGH+A +Y + W +DSR L+S S+D L V
Sbjct: 424 RGHVADVYQISWSADSRLLLSGSKDSTLKV 453
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 36.3 bits (80), Expect = 0.031
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 419 RGHLAKIYAMHWGSDSRNLVSASQDGKLIV 508
RGH+A +Y + W +DSR L+S S+D L V
Sbjct: 373 RGHVADVYQISWSADSRLLLSGSKDSTLKV 402
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 413 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIV 508
T +GH + + W D +LVS S+ G+LI+
Sbjct: 119 TCKGHKNWVLCIAWSPDGNHLVSGSKSGELIL 150
>04_04_0475 +
25500470-25500609,25500697-25500794,25502806-25502915,
25502998-25503293,25503399-25503474,25503577-25503688,
25503955-25504004,25504090-25504392,25504446-25504547,
25505463-25505635,25505745-25505917,25505997-25506106,
25506180-25506329,25506726-25506881,25507000-25507116,
25507277-25507474,25507809-25507952
Length = 835
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 353 LAQATSNLEPIGRIQMRTRR-TLRGHLAKIYAMHWGSDSRNLVSASQD 493
LA AT N+ I ++ ++ TL+GH +++ ++ W S + L S SQD
Sbjct: 699 LAAATENVVSIFDVETNGKKYTLQGHNSEVQSVCWDSSGQYLASVSQD 746
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 386 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQD 493
G Q+ R L+GH I+++ W S NL S S+D
Sbjct: 762 GETQLACRNPLQGHTKNIHSLCWDSTGDNLASVSED 797
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 562 VMTCAYAPSGSYVACGGLDNICSIYSLKTRXGNVRVXRELPGHSGYL 702
V+ +++P+G VA G DN C I+ L+T+ R+ +P H +
Sbjct: 401 VLGVSFSPNGYLVATGSEDNFCRIWDLRTK----RMLYSIPAHKSLI 443
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 562 VMTCAYAPSGSYVACGGLDNICSIYSLKTRXGNVRVXRELPGHSGYL 702
V+ +++P+G VA G DN C I+ L+T+ R+ +P H +
Sbjct: 401 VLGVSFSPNGYLVATGSEDNFCRIWDLRTK----RMLYSIPAHKSLI 443
>04_04_0276 +
24091360-24091464,24091580-24091713,24091813-24092454,
24092858-24093044
Length = 355
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 401 ASVCDRSAPGSRWPGPATCRMPLFSH 324
ASVCDR+AP G CR+PL SH
Sbjct: 272 ASVCDRAAPHD--DGDRPCRVPLCSH 295
>03_06_0753 +
36015026-36015256,36015780-36015885,36016132-36016192,
36016278-36016573,36016654-36016793,36016880-36016954,
36017044-36017134,36017677-36017880,36018409-36018453,
36018745-36018830
Length = 444
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 413 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIV 508
TLRGH + A+H+ D+ NL + DG + V
Sbjct: 90 TLRGHTDSVTALHFSDDACNLATVCADGAVRV 121
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 818 GPLNCPELLPGSRCPNSAQXMSPEAGQNLVVV--EESGSRNR*PEWPGSSRXTR 663
GP N + GS P+SA S E GQ+ V+ +E+G + P SSR T+
Sbjct: 335 GPKNSGSEMHGSFGPDSANASSFEKGQSSAVMYSQENGGEHEIPNGVFSSRATK 388
>11_06_0627 + 25633537-25633884,25635246-25635869
Length = 323
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 511 DSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 651
D+ + + A+ +SWV++ +P G VA G D ++ + TR
Sbjct: 231 DAKEKSLIGAMSGHASWVLSIDVSPDGMAVATGSSDRTVRLWDINTR 277
Score = 29.5 bits (63), Expect = 3.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 559 WVMTCAYAPSGSYVACGGLDNICSIY 636
+V++ A++P G +ACG +D ++Y
Sbjct: 162 FVLSVAWSPDGKLLACGSMDGTIAVY 187
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 413 TLRGHLAKIYAMHWGSDSRNLVSASQD 493
TLRGH A + ++W D L S S D
Sbjct: 120 TLRGHTADVVDLNWSPDDSTLASGSLD 146
>07_03_0011 + 12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 562 VMTCAYAPSGSYVACGGLDNICSIYSLK 645
V + A++P G Y+A G LD I+S+K
Sbjct: 1002 VYSVAFSPGGEYLASGSLDQCLHIWSVK 1029
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 416 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIV 508
L GH +++ + W D+R L S D +L V
Sbjct: 318 LAGHKSEVCGLKWSYDNRQLASGGNDNRLYV 348
>02_05_1194 -
34881450-34881593,34882023-34882220,34882522-34882638,
34882753-34882908,34883192-34883341,34883418-34883527,
34883589-34883730,34883836-34884054,34887004-34887099,
34887187-34887489,34887575-34887624,34888003-34888114,
34888204-34888279,34888389-34888684,34888763-34888872,
34889071-34889120,34890439-34890488,34890636-34890816,
34890901-34890932
Length = 863
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 353 LAQATSNLEPIGRIQMRTRR-TLRGHLAKIYAMHWGSDSRNLVSASQD 493
LA A + I ++ +++ TL+GH + ++ W S L S SQD
Sbjct: 727 LAAAAETMVAIFDVETHSKKYTLQGHNTDVQSVCWDSSGEYLASVSQD 774
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 314 AIRDARKAACDTSLAQAT--SNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSAS 487
A+ R + C LA A+ + + + TLRGH + + W +DS L SAS
Sbjct: 27 AVSCVRFSPCGRLLATASLDGTVALLSPSSLAAIATLRGHADGVSDISWSTDSFYLCSAS 86
Query: 488 QDGKL 502
D L
Sbjct: 87 DDRTL 91
>01_07_0350 +
42941976-42942401,42942510-42942737,42943201-42943380,
42943515-42943730,42943854-42943955,42944377-42944439,
42944526-42944594,42945662-42945730,42947003-42947069,
42947449-42947514,42947600-42947697,42947820-42947857,
42947929-42948016,42948101-42948373,42948470-42948535,
42948624-42948779
Length = 734
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 422 GHLAKIYAMHWGSDSRNLVSASQDGKLIV 508
GH +++ + W D R L S D +L+V
Sbjct: 274 GHRSEVCGLKWSHDDRELASGGNDNQLLV 302
>03_05_0378 -
23619169-23619225,23619389-23619454,23620052-23620224,
23620454-23620664,23621056-23621280,23622157-23622493,
23624200-23624627
Length = 498
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 550 RSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 651
RS V+ A + G Y+A GGLD ++ +++R
Sbjct: 218 RSKQVLALAVSADGRYLASGGLDRHIHLWDVRSR 251
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 401 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVGTATR 523
+ ++TL H + + W D LVSAS D IV A +
Sbjct: 103 KVQKTLLFHHKDVLDLQWSQDGAFLVSASVDNSCIVWDAIK 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,273,476
Number of Sequences: 37544
Number of extensions: 488825
Number of successful extensions: 1458
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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