Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0621
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   0.79 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   1.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.5  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect(2) = 0.79
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 313 GAGSATSAAFKVKKGGRYQMQVELCN 390
           GAG AT     + K  RY  Q E C+
Sbjct: 172 GAGCATQPCSALLKACRYAKQPERCS 197



 Score = 21.8 bits (44), Expect(2) = 0.79
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 511 EKWWALTSSNGVCILESSLWTAFRFRNLT 597
           E + ++ +  G+C   ++L T + FRN T
Sbjct: 198 EIFQSIFTDEGLCCTFNTLDTVYMFRNAT 226


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 461 GLKWLPSVSATTIST-PSLELHPSELQSSTCIWY-LPPFFTL 342
           G  W  + + +T+ T   L+L+P+   S T  WY L P + L
Sbjct: 469 GSAWSVNYNTSTVMTNKELQLNPTTDYSETVYWYGLDPLWML 510


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 573 RVPVPKPDSFALRLHSDLWW*WH 641
           R+P  +   FA RLH +  + WH
Sbjct: 616 RMPSEESHEFAFRLHENPEYTWH 638


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 446 PSVSATTISTPSLELH 399
           PSV   T +TPSL LH
Sbjct: 171 PSVIDVTFATPSLVLH 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.134    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,791
Number of Sequences: 2352
Number of extensions: 12816
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)