Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0620
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.58 
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   5.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   7.2  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -2

Query: 525 MLTKGGPDSTSI*NNFSKTIQDEFQQVNAPPNLR 424
           +LTK  P   SI NN S +       V A P+LR
Sbjct: 150 ILTKTSPTPVSINNNTSTSSSASSPSVTAAPHLR 183


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 179 DCSLGGRDSGKPNFVLMQLHW*HN 108
           DC++GG D  K  F+ + ++  H+
Sbjct: 71  DCNIGGYDFPKDTFLSLFIYGMHH 94


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 793 GQQKSAKYRH*PRGPQQADS 852
           G   SAK+RH  +G ++ADS
Sbjct: 326 GALVSAKHRHLLKGIERADS 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,312
Number of Sequences: 336
Number of extensions: 5191
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)