Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0620
         (862 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a...    33   0.20 
AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z69361-3|CAA93289.1|  533|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z68882-20|CAA93112.1|  533|Caenorhabditis elegans Hypothetical p...    29   3.2  
AL034488-14|CAE11311.1|  341|Caenorhabditis elegans Hypothetical...    29   4.3  
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    28   7.4  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical ...    28   9.8  

>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 218, isoform a protein.
          Length = 1136

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +2

Query: 602 QLHKLPVAVATTSTPKSDSINVVRLPEVXTPDVDITNLDPLDCCDMSEFIQPS 760
           Q   LPV+  ++ST  S    + R+P +  PDV    LD  +C D    + PS
Sbjct: 212 QFDTLPVSFRSSSTSSSTG-GLPRIPNIPVPDVPFIPLDDDNCYDEIMLVTPS 263


>AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK380.2 protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/72 (27%), Positives = 39/72 (54%)
 Frame = +3

Query: 309 CLMYQMIENCPEESLRKDDVCSPVSSLSGFNYMFSQSMYEDLEEHLPVEIRPEWFLRNYF 488
           C+ +Q  E+  +  L      S V SL+   YMFS++ YE L+    ++++P   L +Y+
Sbjct: 382 CINHQFSEHIEKLKLEHK---SYVESLNDLKYMFSEAQYELLDS---LDVKPR-ALCDYY 434

Query: 489 KSKCCQVHL*ST 524
           +++   +H  S+
Sbjct: 435 RARFDLIHFYSS 446


>Z69361-3|CAA93289.1|  533|Caenorhabditis elegans Hypothetical
           protein T13H10.1 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
 Frame = +3

Query: 234 PYPGC-VLENRPRTYTN-TCPGQG-----LLHCLMYQMIENCPEESLRKDDVCSPVSSLS 392
           PYPG  V E  PR       P +      ++  + Y++     EE +   +    + +L 
Sbjct: 321 PYPGMKVAEVLPRVQNGYRMPFEANVPPAIVRFITYRICAGAEEERVTMSEAVRELLTLE 380

Query: 393 GFNYMFSQSMYEDLEEHLPVE 455
           GF+     + Y +L +H+P+E
Sbjct: 381 GFDQAPGSNSYFELPDHIPME 401


>Z68882-20|CAA93112.1|  533|Caenorhabditis elegans Hypothetical
           protein T13H10.1 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
 Frame = +3

Query: 234 PYPGC-VLENRPRTYTN-TCPGQG-----LLHCLMYQMIENCPEESLRKDDVCSPVSSLS 392
           PYPG  V E  PR       P +      ++  + Y++     EE +   +    + +L 
Sbjct: 321 PYPGMKVAEVLPRVQNGYRMPFEANVPPAIVRFITYRICAGAEEERVTMSEAVRELLTLE 380

Query: 393 GFNYMFSQSMYEDLEEHLPVE 455
           GF+     + Y +L +H+P+E
Sbjct: 381 GFDQAPGSNSYFELPDHIPME 401


>AL034488-14|CAE11311.1|  341|Caenorhabditis elegans Hypothetical
           protein Y54G11A.15 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = +2

Query: 2   ARMFFSKTWVCSGYFSYLIWHWCKLSSAHLT*ENLDCVTNGVALIRSWVFRSLCL 166
           AR+F    ++     + +IW +C   + HL  +N   +++G   +    F S+C+
Sbjct: 194 ARLFNPHMYIACALLTSMIWFYCSHIAWHLLPKNNPSMSSGTRKMLKNFFISMCI 248


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
            C10C6.1 protein.
          Length = 1565

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 333  SQSSDTSGSAADPVRDTCWCMY 268
            S SS  S  +A+P R+TC+ MY
Sbjct: 1089 SISSSQSSQSAEPARETCYVMY 1110


>Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical
           protein T13H5.3 protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 857 EPESACCGPRG*CRYLADFC-CP 792
           +P  ACCG  G C   A+FC CP
Sbjct: 442 DPGHACCGKYGYCGSGAEFCSCP 464


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
            protein.
          Length = 1565

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 333  SQSSDTSGSAADPVRDTCWCMY 268
            S SS  S  +A+P R+TC+ MY
Sbjct: 1089 SISSSQSSQSAEPARETCYVMY 1110


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 345 LPDNSQSSDTSGSAADPVRD 286
           LP +SQ+  TSGSAA PV D
Sbjct: 823 LPTSSQTPPTSGSAAPPVDD 842


>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical
           protein K04D7.5b protein.
          Length = 1287

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 597 RSNCINYPSLLPQRQ 641
           RSN I YP+LLP RQ
Sbjct: 491 RSNAIRYPALLPSRQ 505


>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
           protein K04D7.5a protein.
          Length = 1338

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 597 RSNCINYPSLLPQRQ 641
           RSN I YP+LLP RQ
Sbjct: 491 RSNAIRYPALLPSRQ 505


>AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical
           protein C27A12.8 protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 391 LDSITCSHKVCTKIWRSIYLLKFVLN 468
           L  ++C+H+ CT+ W++ YL   + N
Sbjct: 137 LSGLSCNHRACTQCWKA-YLTNKIAN 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,774,883
Number of Sequences: 27780
Number of extensions: 494844
Number of successful extensions: 1219
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)