Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0617
(801 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 369 e-102
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 364 e-101
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 358 3e-99
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 245 3e-65
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 1e-47
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 179 2e-45
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 164 6e-41
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 163 2e-40
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 161 6e-40
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 161 6e-40
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 8e-40
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 1e-39
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 1e-39
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 131 7e-31
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 9e-30
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 125 4e-29
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 4e-25
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 109 2e-24
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 104 7e-23
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 83 3e-16
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 77 2e-14
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 62 4e-10
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 56 4e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 52 4e-07
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 36 0.029
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 36 0.029
SB_29113| Best HMM Match : RVT_1 (HMM E-Value=0.0066) 30 2.5
SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 3.3
SB_17169| Best HMM Match : Pep_M12B_propep (HMM E-Value=1.5e-06) 29 3.3
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 29 4.4
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 5.8
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 28 7.7
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 369 bits (907), Expect = e-102
Identities = 172/215 (80%), Positives = 180/215 (83%)
Frame = +2
Query: 65 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 244
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 245 QVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 424
+ RA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 425 DVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSD 604
DVVRKE+ESCDCLQGFQLTHSLGGG GS + REEYPDRIMNT+SVVPSPKVSD
Sbjct: 331 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD 390
Query: 605 TVVRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
TVV YCIDN ALYDICF
Sbjct: 391 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 425
Score = 48.0 bits (109), Expect = 9e-06
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQ--NHEHILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + N ++ SP N T+ + Q +T + +
Sbjct: 360 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE-NTDETYCIDNE 418
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P YGDLNHLVS TMSGVTTCL+
Sbjct: 419 --ALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 454
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 364 bits (896), Expect = e-101
Identities = 171/212 (80%), Positives = 177/212 (83%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+ESCDCLQGFQLTHSLGGG GS + REEYPDRIMNT+SVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
YCIDN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICF 212
Score = 48.0 bits (109), Expect = 9e-06
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQ--NHEHILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + N ++ SP N T+ + Q +T + +
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE-NTDETYCIDNE 205
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P YGDLNHLVS TMSGVTTCL+
Sbjct: 206 --ALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 358 bits (881), Expect = 3e-99
Identities = 165/212 (77%), Positives = 177/212 (83%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
R++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+ESCDC+QGFQLTHSLGGG GS + REEYPDRIMNT+S+VPSPKVSDTVV
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
YCIDN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICF 212
Score = 48.4 bits (110), Expect = 7e-06
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQ--NHEHILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + N I+ SP N T+ + Q +T + +
Sbjct: 147 MGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVE-NTDETYCIDNE 205
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P YGDLNHLVS TMSGVTTCL+
Sbjct: 206 --ALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 241
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 245 bits (600), Expect = 3e-65
Identities = 117/156 (75%), Positives = 123/156 (78%)
Frame = +2
Query: 242 GQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 421
G+ RA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 422 LDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVS 601
LDVVRKE+ESCDC+QGFQLTHSLGGG GS + REEYPDRIMNT+SVVPSPKVS
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVS 121
Query: 602 DTVVRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
DTVV YCIDN ALYDICF
Sbjct: 122 DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 157
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P YGDLNHLVS TMSGVTTCL+
Sbjct: 165 PTYGDLNHLVSATMSGVTTCLR 186
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 187 bits (455), Expect = 1e-47
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 349
RAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 179 bits (436), Expect = 2e-45
Identities = 79/121 (65%), Positives = 97/121 (80%)
Frame = +2
Query: 236 SGGQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 415
+GG+ R+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 416 SVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPK 595
++ DV+RKE+E+CDC+QG QL +LGGG GS + REEYPDRI++ +SVVPSPK
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPK 130
Query: 596 V 598
V
Sbjct: 131 V 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 164 bits (399), Expect = 6e-41
Identities = 84/217 (38%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK ++ C LQGF + HS GGG GS ++ +R +Y + +++ P+P+VS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 181 VVEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 216
Score = 164 bits (399), Expect = 6e-41
Identities = 83/219 (37%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Frame = +2
Query: 68 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 241
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 242 GQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 421
G+ RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 422 LDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVS 601
LD +RK ++ C LQGF + HS GGG GS ++ +R +Y + +++ P+P+VS
Sbjct: 552 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVS 611
Query: 602 DTVVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 612 TAVVEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 649
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 163 bits (395), Expect = 2e-40
Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK ++ C LQGF + HS GGG GS ++ +R +Y + +++ P+P+VS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 765
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 766 VVEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 801
Score = 162 bits (393), Expect = 3e-40
Identities = 85/241 (35%), Positives = 132/241 (54%), Gaps = 3/241 (1%)
Frame = +2
Query: 2 EFGTRRESRSVVILLQF**NNLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAY 181
++ TR + + + Q L RE + + GQ G QIG WE+ EHGI P G
Sbjct: 41 KYHTREKDQQTQLKTQIDTFILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQM 100
Query: 182 HGDSDLQL--ERINVYYNEASGGQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 355
D + + N +++E G+ RA+ VDLEP +D VR+G + Q+F P+ + G+
Sbjct: 101 PSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGK 160
Query: 356 SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQR 535
A NN+A+GHYT G E+VD VLD +RK ++ C LQGF + HS GGG GS ++ +R
Sbjct: 161 EDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMER 220
Query: 536 FREEYPDRIMNTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFP 712
+Y + +++ P+P++S VV L++ + +H + +DN A+YDIC
Sbjct: 221 LSVDYGKKSKLEFAIYPAPQISTAVVEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRR 279
Query: 713 N 715
N
Sbjct: 280 N 280
Score = 54.8 bits (126), Expect = 8e-08
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 77 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 250
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 251 RARAILVDLEPGTMDSV 301
RA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 161 bits (391), Expect = 6e-40
Identities = 81/216 (37%), Positives = 122/216 (56%), Gaps = 3/216 (1%)
Frame = +2
Query: 77 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 250
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 251 RARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 430
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTV 610
+RK ++ C LQGF + HS GGG GS + +R +Y + +++ P+P+VS V
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 180
Query: 611 VRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
V L++ + +H + +DN A+YDIC N
Sbjct: 181 VEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 215
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 161 bits (391), Expect = 6e-40
Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
RK ++ C LQGF + HS GGG GS +A +R +Y + +++ P+P++S
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 181 VVEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 216
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 161 bits (390), Expect = 8e-40
Identities = 79/219 (36%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Frame = +2
Query: 68 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 241
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 242 GQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 421
G+ RA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 422 LDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVS 601
LD +RK ++ C LQGF + HS GGG GS ++ +R +Y + +++ P+P++S
Sbjct: 537 LDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQIS 596
Query: 602 DTVVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 597 TAVVEPYN-SVLTTHTTLEHSDCAFMVDNEAIYDICRRN 634
Score = 142 bits (344), Expect = 3e-34
Identities = 71/202 (35%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
Frame = +2
Query: 119 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRARAILVDLEPGTM 292
+G WE+ EHGI P G D + + N +++E G+ RA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 293 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 472
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 473 QLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVVRTIQCDSLSSPAS 652
+ HS GGG GS ++ +R +Y + +++ P+P++S VV L++ +
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN-SILTTHTT 179
Query: 653 *KHRR-NYCIDNXALYDICFPN 715
+H + +DN A+YDIC N
Sbjct: 180 LEHSDCAFMVDNEAIYDICRRN 201
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 160 bits (388), Expect = 1e-39
Identities = 79/219 (36%), Positives = 123/219 (56%), Gaps = 3/219 (1%)
Frame = +2
Query: 68 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 241
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 242 GQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 421
G+ RA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 422 LDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVS 601
LD +RK ++ C LQGF + HS GGG GS + +R +Y + +++ P+P++S
Sbjct: 923 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQIS 982
Query: 602 DTVVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 983 TAVVEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 1020
Score = 157 bits (380), Expect = 1e-38
Identities = 80/216 (37%), Positives = 119/216 (55%), Gaps = 3/216 (1%)
Frame = +2
Query: 77 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 250
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E G+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 251 RARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 430
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTV 610
+RK ++ C LQGF + HS GGG GS + +R +Y + +++ P+P +S V
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAV 552
Query: 611 VRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
V L++ + +H + +DN A+YDIC N
Sbjct: 553 VEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 587
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 160 bits (388), Expect = 1e-39
Identities = 79/217 (36%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK ++ C LQGF + HS GGG GS ++ +R +Y + +++ P+P++S
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 181 VVEPYN-SVLTTHTTLEHSDCAFMVDNEAIYDICRRN 216
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 131 bits (316), Expect = 7e-31
Identities = 75/217 (34%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G QIG WE+ EHGI P G D + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK ++ C LQGF + HS GGG GS ++ +R +Y + ++V P+P ++
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASA 170
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
VV L++ + +H + +DN A+YDIC N
Sbjct: 171 VVEPYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 206
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 129 bits (312), Expect = 2e-30
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Frame = +2
Query: 206 ERINVYYNEASGGQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 385
+ N ++ E G+ RA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 386 HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIM 565
HYT G E +D LD +RK ++ C LQGF + HS GGG GS ++ +R +Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 566 NTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
++V P+P++S VV LS+ + +H + +DN A+YDIC N
Sbjct: 132 LEFAVYPAPQISTAVVEPYN-SILSTHTTLEHSDCAFMVDNEAIYDICRRN 181
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 127 bits (307), Expect = 9e-30
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Frame = +2
Query: 227 NEASGGQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 406
+EA+ G+ RA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 407 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVP 586
+V+ V+D +RK ++ C LQGF + HS GGG GS +A ++ +Y + ++V P
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYP 1084
Query: 587 SPKVSDTVVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
+P +S VV L++ + +H + +DN A+YD+C N
Sbjct: 1085 APHISTAVVEPYN-SVLTTHTTLEHSDCTFMVDNEAIYDLCRRN 1127
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 125 bits (302), Expect = 4e-29
Identities = 59/119 (49%), Positives = 77/119 (64%)
Frame = +2
Query: 353 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQ 532
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ+ HSLGGG GS
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 533 RFREEYPDRIMNTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+ REEYPDR+++++ V+PSP VS+TV CIDN ALY+IC+
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEALYNICY 120
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P Y +LN L++ TMSGVTT L+
Sbjct: 128 PTYSELNSLIATTMSGVTTSLR 149
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 112 bits (269), Expect = 4e-25
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Frame = +2
Query: 293 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 472
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 473 QLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVVRTIQCDSLSSPAS 652
+ HS GGG GS ++ +R +Y + +++ P+P++S VV L++ +
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN-SILTTHTT 131
Query: 653 *KHRR-NYCIDNXALYDICFPN 715
+H + +DN A+YDIC N
Sbjct: 132 LEHSDCAFMVDNEAIYDICRRN 153
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 109 bits (263), Expect = 2e-24
Identities = 53/140 (37%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 478
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 479 THSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVVRTIQCDSLSSPAS*K 658
HS GGG GS ++ +R +Y + +++ P+P++S VV L++ + +
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYN-SILTTHTTLE 121
Query: 659 HRR-NYCIDNXALYDICFPN 715
H + +DN A+YDIC N
Sbjct: 122 HSDCAFMVDNEAIYDICRRN 141
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 104 bits (250), Expect = 7e-23
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 478
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 479 THSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVVRTIQCDSLSSPAS*K 658
HS GGG GS ++ +R +Y + ++V P+P++S VV L++ + +
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYN-SILTTHTTLE 121
Query: 659 HRR-NYCIDNXALYDICFPN 715
H + +DN A+YDIC N
Sbjct: 122 HSDCAFMVDNEAIYDICRRN 141
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 82.6 bits (195), Expect = 3e-16
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Frame = +2
Query: 83 IVHLQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 244
IV LQ GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 245 QVRARAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 415
+ ARA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 416 SVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVP 586
VLD+V++E E CD L GF SL GG GS + R+ YP+ + V P
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPNSFIVNNVVWP 179
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +2
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTV 610
+RKE+E CD +QGFQL HSLGGG GS +EEYPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 611 V 613
V
Sbjct: 61 V 61
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 739 YGDLNHLVSFTMSGVTTCLK 798
Y DLNH++S TMSG+TTCL+
Sbjct: 127 YSDLNHIISNTMSGLTTCLR 146
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 585 PRPKYQTLSSEPYNATLSVHQLVE 656
P P+ + EPYNA LSVHQL+E
Sbjct: 52 PSPRVSEIVVEPYNAALSVHQLLE 75
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 615 EPYNATLSVHQLVENXXXXXXXXXXXXXXSAFRIFKLST 731
EPYNA LSVHQL+E ++ KL+T
Sbjct: 86 EPYNAALSVHQLLETTDEVFCIDNEALYDICYKTLKLNT 124
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 62.5 bits (145), Expect = 4e-10
Identities = 56/177 (31%), Positives = 75/177 (42%), Gaps = 7/177 (3%)
Frame = +2
Query: 92 LQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRARAILV 271
L GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 272 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 430
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVS 601
+RKE E CD G + HSL GG GS + + YP + + SV SP VS
Sbjct: 104 MRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP--LAHVMSVAVSPHVS 158
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGQ 247
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GG+
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 248 VRARAILVDLEPGTMDSVR 304
RA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 3e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 439
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 58.8 bits (136), Expect = 5e-09
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +2
Query: 437 KESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVVR 616
K ++ C LQGF + HS GGG GS ++ +R +Y R ++V P+P++S VV
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 617 TIQCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
L++ + +H + +DN A+YDIC N
Sbjct: 315 PYN-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 347
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 62 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 229
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 230 EASGGQ 247
E + G+
Sbjct: 250 ETASGK 255
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +2
Query: 443 SESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVVRTI 622
++ C LQGF + HS GGG GS ++ +R +Y + +++ P+P++S VV
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
Query: 623 QCDSLSSPAS*KHRR-NYCIDNXALYDICFPN 715
L++ + +H + +DN A+YDIC N
Sbjct: 61 N-SILTTHTTLEHSDCAFMVDNEAIYDICRRN 91
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 299 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 439
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 52.4 bits (120), Expect = 4e-07
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Frame = +2
Query: 200 QLERINVYYNEASGGQVRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 379
+L+ I V ++ ++ARA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 57 RLKDIPVGNSKGKIKSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNWY 116
Query: 380 KGHYTEGAELVDSVLDVVRKESESCDCLQGFQL-THSLGGGXGSVWAPSSSQRFREEYPD 556
+ + + VV+ E C + ++ G GS ++YPD
Sbjct: 117 T-LLCKCFAIRKDIFVVVQSFKEWTLCFEAKEMYLEDQNKGTGSGVGTYVLNLLHDDYPD 175
Query: 557 RIMNTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRRNYC-IDNXALYDIC 706
T +V PS D V+ + L+ +H I+N AL DIC
Sbjct: 176 VYRFTTAVYPS--ADDDVITSPYNSVLAMHQLTEHADCVLPIENQALVDIC 224
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 8e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 131 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 232
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 413 DSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPS 589
D+ D +R +E CD LQGFQ+ + G G + + + R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQILADVHNGFGGLMS-QCLEDLRDEYNSKSMITVGCVPA 277
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 413 DSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPS 589
D+ D +R +E CD LQGFQ+ + G G + + + R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQILADVHNGFGGLMS-QCLEDLRDEYNSKSMITVGCVPA 277
>SB_29113| Best HMM Match : RVT_1 (HMM E-Value=0.0066)
Length = 444
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 266 GWRGHVLXRRRLHCSIH*CAPTASQSPHGRHRWGR 162
G+ H + +RR S+H C T + P GR+RW R
Sbjct: 217 GFPSHDVVKRRPVPSLHACRSTL-EDPRGRYRWTR 250
>SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 527 SQRFREEYPDRIMNTYSVVPSPKV-----SDTVVRTIQCDSLSSPAS*KHRRNYCIDNXA 691
S E P+R ++ S PSP V S+ + + DS +S KH+RN C+ N
Sbjct: 1423 SSASEEPEPERKYSSISRSPSPTVVKKAKSNEKKKKSRKDSSNSDTKKKHKRNLCVMNVV 1482
Query: 692 L 694
L
Sbjct: 1483 L 1483
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 387 CPLAQLLPAPDCPKTKLSGRKICP 316
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
>SB_17169| Best HMM Match : Pep_M12B_propep (HMM E-Value=1.5e-06)
Length = 337
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 633 ESHCMVRTTVSDTLGEGTTEYVFMILSGYSSRNL*DEEGAHT--DPXPPPR 487
E+H + + +++ GE TT Y+ MI SS L + + T D PPPR
Sbjct: 286 ETHMIADSFITEKYGEETTNYLLMIAHVVSSSILANPWPSATFLDLSPPPR 336
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 188 DSDLQLERINVYYNEASGGQVRARAILVDLEPGTMDSV 301
D+D ++ + VYYN +S G++ ++ LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILCKS-LVDKIPDALQRV 43
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 363 APDCPKTKLSGRKICPKGPERTESMVPGSKST 268
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 544 RVPRQNHEHILSSPLAQSIRHCRPNHTMR 630
RV R+N HI+S+PL Q IR +P+ +R
Sbjct: 249 RVYRRNRRHIISTPLDQPIR-LQPSSPVR 276
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 583 PLAQSIRHCRPNHTMRLSQFTS*LKTQ-TKLLHRQRGSIRHLLSEFSNCP 729
P + +R C+ NH M ++ L+++ ++L H +RHL +E+ N P
Sbjct: 2641 PREEIVRSCK-NHLMDVACPDGVLRSEKSRLNHENDEEVRHLSTEYFNSP 2689
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 229 IVVYIDALQLQVRVPM-VGTGGVDAVLVRDDLPELSSN 119
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,477,215
Number of Sequences: 59808
Number of extensions: 595187
Number of successful extensions: 1818
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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