Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0617
(801 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 152 1e-38
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 152 1e-38
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 152 1e-38
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 152 1e-38
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 26 1.6
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 24 4.8
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 8.3
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 8.3
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 152 bits (368), Expect = 1e-38
Identities = 74/108 (68%), Positives = 77/108 (71%)
Frame = +2
Query: 386 HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIM 565
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTHSLGGG GS + REEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 566 NTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
NTYSVVPSPKVSDTVV YCIDN ALYDICF
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICF 108
Score = 54.0 bits (124), Expect = 5e-09
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQ--NHEHILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + N ++ SP N T+ + Q +T + +
Sbjct: 43 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVE-NTDETYCIDNE 101
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P+P YGDLNHLVS TMSGVTTCL+
Sbjct: 102 --ALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLR 137
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 152 bits (368), Expect = 1e-38
Identities = 74/108 (68%), Positives = 77/108 (71%)
Frame = +2
Query: 386 HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIM 565
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTHSLGGG GS + REEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 566 NTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
NTYSVVPSPKVSDTVV YCIDN ALYDICF
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICF 108
Score = 54.0 bits (124), Expect = 5e-09
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQ--NHEHILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + N ++ SP N T+ + Q +T + +
Sbjct: 43 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVE-NTDETYCIDNE 101
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P+P YGDLNHLVS TMSGVTTCL+
Sbjct: 102 --ALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLR 137
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 152 bits (368), Expect = 1e-38
Identities = 74/108 (68%), Positives = 77/108 (71%)
Frame = +2
Query: 386 HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIM 565
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTHSLGGG GS + REEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 566 NTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
NTYSVVPSPKVSDTVV YCIDN ALYDICF
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICF 108
Score = 54.0 bits (124), Expect = 5e-09
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQ--NHEHILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + N ++ SP N T+ + Q +T + +
Sbjct: 43 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVE-NTDETYCIDNE 101
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P+P YGDLNHLVS TMSGVTTCL+
Sbjct: 102 --ALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLR 137
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 152 bits (368), Expect = 1e-38
Identities = 74/108 (68%), Positives = 77/108 (71%)
Frame = +2
Query: 386 HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIM 565
HYTEGAELVD+VLDVVRKE E+CDCLQGFQLTHSLGGG GS + REEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 566 NTYSVVPSPKVSDTVVRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
NTYSVVPSPKVSDTVV YCIDN ALYDICF
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICF 108
Score = 54.0 bits (124), Expect = 5e-09
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQ--NHEHILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + N ++ SP N T+ + Q +T + +
Sbjct: 43 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVE-NTDETYCIDNE 101
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P+P YGDLNHLVS TMSGVTTCL+
Sbjct: 102 --ALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLR 137
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 25.8 bits (54), Expect = 1.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWE 139
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 24.2 bits (50), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -1
Query: 549 YSSRNL*DEEGA--HTDPXPPPR 487
YS+RN +E+ H P PPPR
Sbjct: 1111 YSARNTSEEQRGRRHPTPSPPPR 1133
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.4 bits (48), Expect = 8.3
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 351 PKTKLSGRKICPKGPERTESMVPGSKSTRMARARTXPP 238
P T+++ P+G R ++ + RAR PP
Sbjct: 478 PPTRVAAAAAAPEGRRRRRAIARARRRRCRPRARRNPP 515
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.4 bits (48), Expect = 8.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 347 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
FG G + G YT +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,215
Number of Sequences: 2352
Number of extensions: 20321
Number of successful extensions: 81
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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