Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0617
(801 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 326 8e-90
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 323 7e-89
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 323 7e-89
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 323 1e-88
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 323 1e-88
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 321 4e-88
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 320 5e-88
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 320 9e-88
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 319 1e-87
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 159 3e-39
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 159 3e-39
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 158 5e-39
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 157 6e-39
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 157 6e-39
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 155 3e-38
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 155 3e-38
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 133 1e-31
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 133 1e-31
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 41 8e-04
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.6
At4g37190.1 68417.m05265 expressed protein 30 2.1
At3g62910.1 68416.m07067 peptide chain release factor, putative ... 29 2.7
At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 28 8.3
At1g57700.1 68414.m06548 protein kinase family protein contains ... 28 8.3
At1g19650.1 68414.m02449 SEC14 cytosolic factor, putative / phos... 28 8.3
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 28 8.3
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 326 bits (802), Expect = 8e-90
Identities = 151/213 (70%), Positives = 171/213 (80%), Gaps = 1/213 (0%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 250
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 251 RARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 430
RA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTV 610
VRKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 611 VRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
V +DN ALYDICF
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICF 213
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P +GDLNHL+S TMSGVT L+
Sbjct: 221 PSFGDLNHLISATMSGVTCSLR 242
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 323 bits (794), Expect = 7e-89
Identities = 149/212 (70%), Positives = 169/212 (79%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+DN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P +GDLNHL+S TMSGVT CL+
Sbjct: 220 PSFGDLNHLISATMSGVTCCLR 241
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 323 bits (794), Expect = 7e-89
Identities = 151/213 (70%), Positives = 169/213 (79%), Gaps = 1/213 (0%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 250
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 251 RARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 430
RA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTV 610
VRKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 611 VRTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
V +DN ALYDICF
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICF 213
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P +GDLNHL+S TMSGVT L+
Sbjct: 221 PSFGDLNHLISATMSGVTCSLR 242
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 323 bits (793), Expect = 1e-88
Identities = 150/212 (70%), Positives = 167/212 (78%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+DN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P +GDLNHL+S TMSGVT CL+
Sbjct: 220 PSFGDLNHLISATMSGVTCCLR 241
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 323 bits (793), Expect = 1e-88
Identities = 150/212 (70%), Positives = 167/212 (78%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+DN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P +GDLNHL+S TMSGVT CL+
Sbjct: 220 PSFGDLNHLISATMSGVTCCLR 241
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 321 bits (788), Expect = 4e-88
Identities = 150/212 (70%), Positives = 167/212 (78%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+DN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQNHE--HILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + + SP N T+ + Q ++ + +
Sbjct: 147 MGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL---VENADECMVLD 203
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + +P +GDLNHL+S TMSGVT CL+
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLR 241
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 320 bits (787), Expect = 5e-88
Identities = 148/212 (69%), Positives = 167/212 (78%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+DN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 733 PXYGDLNHLVSFTMSGVTTCLK 798
P +GDLNHL+S TMSGVT CL+
Sbjct: 220 PSFGDLNHLISATMSGVTCCLR 241
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 320 bits (785), Expect = 9e-88
Identities = 148/212 (69%), Positives = 168/212 (79%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+E+CDCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+DN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQNHE--HILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + + SP N T+ + Q ++ + +
Sbjct: 147 MGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL---VENADECMVLD 203
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + P +GDLNHL+S TMSGVT CL+
Sbjct: 204 NEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLR 241
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 319 bits (784), Expect = 1e-87
Identities = 150/212 (70%), Positives = 167/212 (78%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 253
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 254 ARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 433
RA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 434 RKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDTVV 613
RKE+E+ DCLQGFQ+ HSLGGG GS + REEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 614 RTIQCDSLSSPAS*KHRRNYCIDNXALYDICF 709
+DN ALYDICF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICF 212
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 511 MGTLLISKIP*RVPRQNHE--HILSSPLAQSIRHCRPNHTMRLSQFTS*LKTQTKLLHRQ 684
MGTLLISKI P + + SP N T+ + Q ++ + +
Sbjct: 147 MGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL---VENADECMVLD 203
Query: 685 RGSIRHLLSEFSNCPHPXYGDLNHLVSFTMSGVTTCLK 798
++ + +P +GDLNHL+S TMSGVT CL+
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLR 241
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 159 bits (385), Expect = 3e-39
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
VRK +++C LQGF + +++GGG GS +R +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDIC 706
VV LS+ + +H +DN A+YDIC
Sbjct: 181 VVEPYN-SVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 159 bits (385), Expect = 3e-39
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
VRK +++C LQGF + +++GGG GS +R +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDIC 706
VV LS+ + +H +DN A+YDIC
Sbjct: 181 VVEPYN-SVLSTHSLLEHTDVAVLLDNEAIYDIC 213
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 158 bits (383), Expect = 5e-39
Identities = 81/214 (37%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK +++C LQGF + +++GGG GS +R ++ + +++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDIC 706
VV LS+ + +H +DN A+YDIC
Sbjct: 181 VVEPYN-SVLSTHSLLEHTDVVVLLDNEAIYDIC 213
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 157 bits (382), Expect = 6e-39
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK +++C LQGF + +++GGG GS +R +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDIC 706
VV LS+ + +H + +DN A+YDIC
Sbjct: 181 VVEPYN-SVLSTHSLLEHTDVSILLDNEAIYDIC 213
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 157 bits (382), Expect = 6e-39
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK +++C LQGF + +++GGG GS +R +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDIC 706
VV LS+ + +H + +DN A+YDIC
Sbjct: 181 VVEPYN-SVLSTHSLLEHTDVSILLDNEAIYDIC 213
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 155 bits (376), Expect = 3e-38
Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK +++C LQGF + +++GGG GS +R +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDIC 706
VV LS+ + +H + +DN A+YDIC
Sbjct: 181 VVEPYN-SVLSTHSLLEHTDVSILLDNEAIYDIC 213
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 155 bits (376), Expect = 3e-38
Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 247
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 248 VRARAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 427
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 428 VVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSPKVSDT 607
+RK +++C LQGF + +++GGG GS +R +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 608 VVRTIQCDSLSSPAS*KHRR-NYCIDNXALYDIC 706
VV LS+ + +H + +DN A+YDIC
Sbjct: 181 VVEPYN-SVLSTHSLLEHTDVSILLDNEAIYDIC 213
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 133 bits (322), Expect = 1e-31
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Frame = +2
Query: 77 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 256
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 430
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSP-KVSDT 607
+ +E++ D L+GF L HS+ GG GS + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 608 VVR 616
VV+
Sbjct: 182 VVQ 184
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 133 bits (321), Expect = 1e-31
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Frame = +2
Query: 77 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 256
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 257 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 430
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 431 VRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVPSP-KVSDT 607
+ +E++ D L+GF L HS+ GG GS + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 608 VVR 616
VV+
Sbjct: 182 VVQ 184
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 407 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVVP 586
+++SV VVRKE+E+C+CLQ F ++ S SV A + FRE D + Y V
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGSF--KVDSVEAKKKEENFRETLRDMANSKYEYVK 57
Query: 587 SPKVSDTVV 613
S ++ D V+
Sbjct: 58 SFELEDEVM 66
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 486 PSVAAPGPYG--HPPHLKDSVKSTPTES*THTQ*SPRPKYQTLSSEPYN 626
P+ AP P +PP+L++ K P ES Q SP+P +T S EP N
Sbjct: 413 PTPKAPEPKKEINPPNLEEPSKPKPEESPKPQQPSPKP--ETPSHEPSN 459
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 74 MREIVHLQAGQCGNQIGAKFWEIISDEHGI 163
MREIV +Q G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At3g62910.1 68416.m07067 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 422
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -2
Query: 431 LHRGP----SQRAQHPLCSVPWPSCCQRRTVRRRSCPDGRSVRKVQSGQSPW 288
LH P S+++ +C V WP RRT R + +RK++S + W
Sbjct: 17 LHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTW 68
>At2g41830.1 68415.m05169 cyclin-related contains Pfam profile
PF02984: Cyclin, C-terminal domain
Length = 1025
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 407 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGXGSVWAPSSSQRFREEYPDRIMNTYSVV 583
+VD+ +D++ E D + +H +G S+WA S S + + I NTYS+V
Sbjct: 613 VVDNSVDLLNSE---LDVVHIRLSSHQIGLLLSSIWAQSISPANTPDNYEAIANTYSLV 668
>At1g57700.1 68414.m06548 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 686
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 301 PLWTFRTDLPSGQLRLRTVRRWQQLGQGTLHR 396
P++T + P+G +LRT R + Q G G L R
Sbjct: 531 PIYTNGDNHPNGSSQLRTQRSYVQRGSGQLSR 562
>At1g19650.1 68414.m02449 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
SP:P24859 from [Kluyveromyces lactissimilar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; contains Pfam PF00650 :
CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
N-terminus
Length = 608
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 389 YTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLG--GGXGSVWA 517
Y E +VD V+DV + E + +G Q T SLG G +W+
Sbjct: 421 YEECVPMVDKVVDVAWQLQEMPNASEGPQYTSSLGKIGSVRHIWS 465
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 295 VHGAGLQVDEDGAGTYLXAG 236
+ G G+ VD DGAG +L AG
Sbjct: 159 IEGTGVFVDRDGAGKHLQAG 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,131,448
Number of Sequences: 28952
Number of extensions: 405496
Number of successful extensions: 1176
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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