Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0616
(855 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 40 0.003
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1) 32 0.68
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 31 1.2
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 31 1.6
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 30 2.1
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 30 2.8
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 30 2.8
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 3.6
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 29 3.6
SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) 29 3.6
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 3.6
SB_48285| Best HMM Match : Torsin (HMM E-Value=0) 29 6.4
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 29 6.4
SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08) 29 6.4
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_48714| Best HMM Match : TrmB (HMM E-Value=0.71) 28 8.4
SB_41679| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.7) 28 8.4
SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14) 28 8.4
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 8.4
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 306 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 485
I EQ +E + KME +EKR++Y+ L++RL + VE+ R T+E+
Sbjct: 189 IAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEEIQMFQ 248
Query: 486 YKAIEDKI 509
K +E+K+
Sbjct: 249 RKILEEKL 256
>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 31.9 bits (69), Expect = 0.68
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 339 ATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEV 485
A ++AL+A +E R+ + ELR ++ + E +E+ R+ E+Q AE+
Sbjct: 52 AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRAEEQMAEI 101
>SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1)
Length = 256
Score = 31.9 bits (69), Expect = 0.68
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Frame = +2
Query: 338 RHQGGSRRQDGDPRGKTRGLHQRAALP-SQGSS*GR*EDQVDPGTA-DRGSVQGHRR*DT 511
R + GSR + R ++RG + ++ S S R E G + DR HRR +
Sbjct: 109 RSRSGSRSKSRS-RSRSRGRSRSYSISISPDSHKSRSESPSSDGESPDRQRPSPHRR--S 165
Query: 512 TAADKRDENLKKMIERLRET*GTSSQGPRRQPGEVPAASRAPSRRSLQQAADRRLL--IG 685
+++D L K + L + PR + SR+P RS + +R G
Sbjct: 166 RPRNRKDRQLDKKTKTLPNSYAPKRDKPRERKKVARDRSRSPRSRSRSRERTKRHYEKYG 225
Query: 686 S*AERETTQP*TGAPKLVPAEQERPHENR 772
RE T+ G ++R H R
Sbjct: 226 RDRNRERTRDRNGVDNKSRDREDRDHSRR 254
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +3
Query: 339 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKIPQ 515
+ KE +M T +EK + + ++L+D L K++ Q+ +E Y+A+++++ Q
Sbjct: 423 SNKEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQ 481
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/72 (22%), Positives = 41/72 (56%)
Frame = +3
Query: 303 RIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 482
R ++ Q + + ++ + + + H EK EA NE++ + K+ L+ +++ +E++ E
Sbjct: 444 RKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQQGKEWLKQDKESHKQIEEREKE 503
Query: 483 VYKAIEDKIPQL 518
K++ D++ +L
Sbjct: 504 C-KSLRDEVRKL 514
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 602 QPGEVPAASRAPSRRSLQQAADRRLLIGS*AERETTQP*TGAPKLVPAEQERPHENRGPR 781
+P VPA + A S +S AA +T +P + P PA Q++ EN+ R
Sbjct: 1655 KPEAVPAKTGAASTKSGPSAAKPGSTKSGTLSAKTGEPPSRTPASRPALQKKAEENKPER 1714
Query: 782 PSS 790
P S
Sbjct: 1715 PKS 1717
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 707 TQP*TGAPKLVPAEQERPHENRG-PRPSSGXNAGLPXK 817
++P AP PA +RP +G P+PS G + G P K
Sbjct: 525 SKPAAAAPASKPAPVKRPAAKKGPPKPSGGASKGPPKK 562
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 30.3 bits (65), Expect = 2.1
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Frame = +2
Query: 254 EDGRHCSEDGQDRGGVPHPQR---ADE*LHRRHQGGSRRQDGDPRGKTRGLHQRAALPSQ 424
E+ R S+ ++R P+ +D+ HR G RR+ PR ++R R+ P +
Sbjct: 406 EEERRLSQTQENRDSKFRPESDDPSDKNQHRERSPGHRRRSQSPRRRSRSPGHRSRSPRR 465
Query: 425 G--SS*GR*EDQVDPGTADRGSVQGHRR*DTTAADKRDENLKKMIERLRET*GTSSQGPR 598
G R D+ D DR + R DK E K ER RE P
Sbjct: 466 GRDRDRDRGRDRRD-RDRDRDRDRDRGRDRDRDKDKGHERPKDRDERDREK--VKEAEPE 522
Query: 599 RQPGEVPAASR 631
+ +PA +
Sbjct: 523 TKNPHIPAVEK 533
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +3
Query: 345 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKIPQL 518
+E ++ T E EA +++L + EG+ +++++L++ +E++ +EDK +L
Sbjct: 447 QEDIERHQLTKERLHEA-VSDLLELTRGETEGLRESQISLDENWSELWALLEDKEEEL 503
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 297 PPRSWPSSEQWRPSSSFQATSP 232
PP S P+S Q+ PSSSF A P
Sbjct: 107 PPASHPNSAQYPPSSSFGANMP 128
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 363 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKIPQL 518
+ME+ +EK E+ + ELR++L D LE + T +E++ E+ E ++ +L
Sbjct: 118 EMESEQEKHESELEELRAQL-DKLENSD-TESLVEERMKELKANYEREVEEL 167
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 578 TSSQGPRRQPGEVPAASRAPSRRSLQQAADRR 673
T SQGP+ P P A R P RR + R+
Sbjct: 261 TGSQGPKHDPTSGPTAMRFPKRRRKRNKRKRK 292
>SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44)
Length = 1220
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -3
Query: 664 GGLLQASPGWRSRSCWNFSWLPAR--TLRTCSSCFAQTL--DHLLEVLVALVGSCGILSS 497
GG+ QA G + WNF PAR + ++ F + L D ++EVLVA G +
Sbjct: 246 GGVFQAVSGRTGKLLWNFGDQPARDTNMNMYTAQFIRDLDGDGVMEVLVAHGGDPLATPA 305
Query: 496 MALY 485
LY
Sbjct: 306 AGLY 309
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +2
Query: 359 RQDGDPRGKTRGLHQRAALPSQGSS*GR*EDQVDPGTADRGSVQGHRR*DTTAADKRDEN 538
+QD + KTR +AA P Q S + Q D D Q R+ T+ +D+
Sbjct: 621 KQDASRKTKTRKPQDQAARPRQASRKTKTSKQPDQDKQDARPRQASRKTKTSKPQDQDKQ 680
Query: 539 LKKMIERLRET*GTSSQGPR-RQPGEVPAASRAPSRRSLQQA 661
+ + + + Q R +Q + + + SR+ QQA
Sbjct: 681 AARPSCKTKTSNPQDKQAARPKQARQAGSKTSKTSRQQNQQA 722
>SB_48285| Best HMM Match : Torsin (HMM E-Value=0)
Length = 636
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 693 QREKLRNHEPARRSWFRQNKSART 764
+R+ RNH SWFRQN A T
Sbjct: 8 ERQFQRNHSLPEGSWFRQNTEAST 31
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 345 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 479
K+ D+ E H+E ++ + E K H+E ++ T + +EQQ A
Sbjct: 1422 KKVQDSSNEIHKENQD--LREELKMAKRHIESLKSTLIQVEQQAA 1464
>SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08)
Length = 401
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/98 (19%), Positives = 38/98 (38%)
Frame = +3
Query: 354 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKIPQLPXXXX 533
L K E + ++ E Y+ + + + + +K R L++Q AE +
Sbjct: 32 LRGKREAYMKRHELYVKSMYGNVIEKEQVRQKQRALLQEQIAEQDNKHRQYLDDR-YKES 90
Query: 534 XXXXXXXXVCAKHEEQVRKVRAGNQEKFQQLRERHPGE 647
C + + + R R +KF+ +RHP +
Sbjct: 91 NFAIHYDEACRRQDAEDRNNRKAYLQKFRDENKRHPND 128
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 606 QEKFQQLRERHP--GEACSRPPTDVCSLEAEQREKLRNHEPARRSWFRQNKSARTRTXGP 779
QE+F R RH G S P TD +LE + + +++ AR++ +RQ+K + R+ P
Sbjct: 202 QERFPTFRGRHERLGLYQSEPGTD--TLELQGKNGIQSGRLARKASYRQSKYCK-RSRNP 258
>SB_48714| Best HMM Match : TrmB (HMM E-Value=0.71)
Length = 199
Score = 28.3 bits (60), Expect = 8.4
Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Frame = +3
Query: 363 KMETHEEKREAYINELRSRLKDHLE----GVEKTRLTLEQQTAEVYKAIEDKIPQLPXXX 530
K+E E+K+ ++ +LR + +E V L L+ TA+++ I+ +
Sbjct: 36 KLELEEQKKNVFVTQLREEDDEDVETRKYQVVNEVLWLDYFTAQIW-WIDLDLTSGKLLE 94
Query: 531 XXXXXXXXXVCAKHEEQVRKVRAGNQEKFQQLRERHPGEACSRPPTDVCSLEAEQREKLR 710
+ K + +V KV+ + K QQ ER AC R ++ + + R+++
Sbjct: 95 TGLKTFQSTLLLKKQLEVEKVQEDLEIKRQQFAERM--AACKRKEEELKKKQLQIRDRVG 152
Query: 711 NHEPARRSWFRQNKSARTR 767
E + ++N++ R R
Sbjct: 153 KFE----KFIKENEAKRRR 167
>SB_41679| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.7)
Length = 78
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 360 AKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKIPQL 518
+K+ H+E + IN+L + + L+ + +L+Q E ++ DKI +L
Sbjct: 2 SKVNGHKETVDKAINDLSEKFNESLQRMNNKISSLQQVLHEKRSSMADKISEL 54
>SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14)
Length = 784
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 333 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKIP 512
+VA K + +K+ H+E + IN+L + + L+ + +L Q E ++ DKI
Sbjct: 530 LVARKNSR-SKVNGHKETVDKAINDLSEKFNESLQRMNNKISSLHQVLHEKRSSMADKIS 588
Query: 513 QL 518
+L
Sbjct: 589 EL 590
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 300 SRIRSEQTNNFIVATK-EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 476
SR+ SE + I K + +A +E ++K + INE R +L++ ++ ++ +
Sbjct: 1455 SRLNSELEDALIDLEKAQTNNANLEKKQKKIDIQINEWRVKLEEVQADLDNSQKEARNYS 1514
Query: 477 AEVYK 491
E+YK
Sbjct: 1515 TEMYK 1519
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,206,536
Number of Sequences: 59808
Number of extensions: 439390
Number of successful extensions: 2029
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2027
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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