Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0616
         (855 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    29   0.18 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.55 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   1.7  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.2  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    24   5.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   5.1  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +2

Query: 272 SEDGQDRGGVPHPQRADE*--LHRRHQGGSRRQDGDPRGKTRGLHQR 406
           ++ G  + GV  PQ++ +    HR+HQ    +Q+G  + +  G+HQ+
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +3

Query: 567 KHEEQVRKVR--AGNQEKFQQLRERHPGEACSRPPTDVCSLEAEQREKLRNHEPARRSWF 740
           + EE+ R+ R  A  +EK ++LRE+   E   +   +    E E+RE+ +  +  R    
Sbjct: 453 REEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQ 512

Query: 741 RQNKSAR 761
           R+ +  R
Sbjct: 513 REKERER 519


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 300 SRIRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 476
           S+ R  +  + +   +E L DAK++ HE+ R     E+    K  + GV    + + Q T
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPT 535

Query: 477 AEVYKAIEDKI 509
            + Y     K+
Sbjct: 536 HKRYNVAVTKV 546


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 515 AADKRDENLKKMIERLRET*GTSSQGPRRQPGEVPAASRAPSRRSLQQ 658
           AA +RD ++   +   +   G  S  PR+ P  +P  S A  ++  QQ
Sbjct: 175 AAHQRDRDVLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQ 222


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 630 ERHPGEACSRPPTDVCSLEAEQREKLRNHEP 722
           ERH GE       ++  LE   +E LR H P
Sbjct: 279 ERHNGELTYEAAMEMDYLECVLKECLRKHPP 309


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 383 KTRGLHQRAA-LPSQGSS*GR*EDQVDPGTADRGSVQ 490
           +TR + +R   LP +G+  G       PGT DR S+Q
Sbjct: 2   ETRSMRKRTTRLPEEGAPTG-----AGPGTGDRASIQ 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,276
Number of Sequences: 2352
Number of extensions: 13161
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)