Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0616
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 0.89
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 2.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 3.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 3.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 3.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 4.7
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 4.7
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 23 4.7
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 4.7
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 8.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 8.3
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.89
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 567 KHEEQVRKVRAGNQEKFQQLRER 635
K+E + RK R ++E+F+ RER
Sbjct: 284 KNEREYRKYRETSKERFRDRRER 306
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.8 bits (49), Expect = 2.1
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Frame = +3
Query: 378 EEKREAYINELRSRLKDHLEGV---------EKTRLTLEQQTAEVYKAIEDK 506
E+K + + + S+L D LE V E +LTL Q+TA+ +K ++DK
Sbjct: 354 EKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTL-QETADAFKDLQDK 404
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 745 CRNQLRRAGSWLRSFSLCSASNEQTSVGG 659
C L +R + C A+NE+T GG
Sbjct: 548 CVGNLASNNDRIRQVTKCKATNEETYRGG 576
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 745 CRNQLRRAGSWLRSFSLCSASNEQTSVGG 659
C L +R + C A+NE+T GG
Sbjct: 548 CVGNLASNNDRIRQVTKCKATNEETYRGG 576
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 745 CRNQLRRAGSWLRSFSLCSASNEQTSVGG 659
C L +R + C A+NE+T GG
Sbjct: 548 CVGNLASNNDRIRQVTKCKATNEETYRGG 576
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 661 RRPTSAHWKLSRERNYATMNRRA 729
RRP S H S + +Y+T+ R A
Sbjct: 1327 RRPLSEHIYSSIDSDYSTLERTA 1349
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 407 LVDVGLAFFLVGLHLGVESLLGGDDEVI 324
L+D + F + LG+ L +DEV+
Sbjct: 146 LMDSDVIFVTINYRLGILGFLSTEDEVV 173
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 407 LVDVGLAFFLVGLHLGVESLLGGDDEVI 324
L+D + F + LG+ L +DEV+
Sbjct: 17 LMDSDVIFVTINYRLGILGFLSTEDEVV 44
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 407 LVDVGLAFFLVGLHLGVESLLGGDDEVI 324
L+D + F + LG+ L +DEV+
Sbjct: 146 LMDSDVIFVTINYRLGILGFLSTEDEVV 173
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 171 LTRKDSFRRRDXREAEGS*RE 233
L +SFR+R REA G+ R+
Sbjct: 433 LAGDESFRKRRQREAAGNCRK 453
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 4 SDAIQLFRSLCRLKVEAMEVETKSTEIR 87
SD I LFR +++ A E++ EIR
Sbjct: 109 SDDISLFRGPEGIQINATELQKIELEIR 136
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,580
Number of Sequences: 438
Number of extensions: 3754
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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