Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0615
         (798 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0166 + 1154695-1156569                                           29   4.3  
08_02_0265 - 15012662-15013918                                         29   5.7  
07_03_0002 - 12236436-12237130,12237603-12237750                       28   7.5  
03_01_0293 - 2258647-2258754,2258861-2259085                           28   7.5  
01_06_0061 - 26071984-26072343,26072792-26073139,26073228-260733...    28   7.5  
05_04_0144 + 18389877-18390431                                         28   9.9  
05_03_0447 - 14128029-14129054                                         28   9.9  

>02_01_0166 + 1154695-1156569
          Length = 624

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 321 NINHTAYRIRLNLFQHMYYIVISKTV 398
           N+N  AY+I  +L+ H YYI + K +
Sbjct: 495 NLNDRAYKIVTSLYDHGYYIKMEKLI 520


>08_02_0265 - 15012662-15013918
          Length = 418

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 651 LLLHNRHRHKGAAGW-RWRTVTLARPTAC 568
           LL+ +RHRH G AG+  +R   L R  +C
Sbjct: 253 LLMADRHRHGGDAGYHEYRVYALERDASC 281


>07_03_0002 - 12236436-12237130,12237603-12237750
          Length = 280

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 500 TLDTHTNKSQYHEHSHCS*TNTWHAVGRARVT 595
           TLD  T K QY+   H + T  W  +  A+ T
Sbjct: 230 TLDMQTGKIQYNLEEHIAQTQEWQQIADAQFT 261


>03_01_0293 - 2258647-2258754,2258861-2259085
          Length = 110

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 543 HTVHKQTLGTRLVAP 587
           HT+H  TLGTRL+ P
Sbjct: 69  HTIHGHTLGTRLIEP 83


>01_06_0061 -
           26071984-26072343,26072792-26073139,26073228-26073371,
           26073454-26073723,26075019-26075825
          Length = 642

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -1

Query: 225 KSSKKVVQIPCNF--LSFSYRKTNRTKKSFPLLVTTTSSRL*P*YVSWIDMPSICFFNYL 52
           K+ KK+V +   F  + F+Y     TK    +    +S+ + P   +W+++P    F  L
Sbjct: 117 KTLKKIVPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLL 176

Query: 51  YVQGTN 34
           Y + +N
Sbjct: 177 YTKLSN 182


>05_04_0144 + 18389877-18390431
          Length = 184

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 636 RHRHKGAAGWRWR 598
           RHR  G  GWRWR
Sbjct: 34  RHRRCGGGGWRWR 46


>05_03_0447 - 14128029-14129054
          Length = 341

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 645 LHNRHRHKGAAGWRWRTVTLARPTACQVFVYEQCECSWYW 526
           L   HR +G  GW  R + + R    +V    + EC+  W
Sbjct: 227 LRKIHRLRGLPGWSLRRLDVTRVLELKVEARSEAECAAAW 266


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,965,567
Number of Sequences: 37544
Number of extensions: 339603
Number of successful extensions: 725
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)