Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0615
         (798 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)                 29   5.8  
SB_10706| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.8  
SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_21284| Best HMM Match : F5_F8_type_C (HMM E-Value=1.8e-21)          28   7.6  

>SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)
          Length = 1338

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 525 ANTTNTHTVHKQTLGTRLVAPGSXFASATQRHPYDDGGYAVVMDSWNISS 674
           ANTT  +       G R V+ GS   S  QR P++  GY   +    +SS
Sbjct: 645 ANTTYKNRFCAACNGERHVSCGSALFSGKQRGPFESSGYHKPISPHGLSS 694


>SB_10706| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 573 ACQVFVYEQCECSWYWLLLVCVSKVQLK 490
           AC+    +    SWYWL+L  V ++ ++
Sbjct: 60  ACETLAIDVGPASWYWLMLASVGEILIE 87


>SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 468 KLWNSNSPSIAL*IRTPIKANTTNTHTVHKQTL 566
           K WNS   ++A  +R P + + T+ HTV+ Q +
Sbjct: 128 KRWNSLRQNLAASLRDPPQVHMTDFHTVYPQLM 160


>SB_21284| Best HMM Match : F5_F8_type_C (HMM E-Value=1.8e-21)
          Length = 564

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 339 KQCDLCLKSGLRYKQKNLF*IFKV*RNHIKLIIKVNHFKSSKKVVQ 202
           K C  C K  L YK+ N+F I+K     +   + V   K +K+ ++
Sbjct: 224 KNCRFCQKRSLPYKETNIFLIWKNCMIPVIFKVAVPQSKHAKRAIR 269


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,227,796
Number of Sequences: 59808
Number of extensions: 412714
Number of successful extensions: 853
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)