Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0615
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024800-5|AAF60724.1|  966|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z81036-2|CAD30433.1|  431|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z81036-1|CAB02742.1|  473|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>AC024800-5|AAF60724.1|  966|Caenorhabditis elegans Hypothetical
           protein Y49F6A.1 protein.
          Length = 966

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 366 VEISLTVFC-KQCDLCLKSGLRYKQK 292
           V I+L+ FC K CDLC +SGL  +++
Sbjct: 529 VSINLSDFCMKLCDLCRRSGLEIRRE 554


>Z81036-2|CAD30433.1|  431|Caenorhabditis elegans Hypothetical
           protein C16C2.2b protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 427 GYISPLLDTGYE**NYGTVTRLQLHFRYAHQ*KPIPRT-LTLFINKHLARGWSRQG 591
           GY+ P+++ G    + GT+ RLQ  + +  Q + +P     +++NK L R   + G
Sbjct: 67  GYMFPVIEHGQPFKDDGTLYRLQRPYFWPSQAELVPDVEYAIYLNKRLLRNEQKHG 122


>Z81036-1|CAB02742.1|  473|Caenorhabditis elegans Hypothetical
           protein C16C2.2a protein.
          Length = 473

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 427 GYISPLLDTGYE**NYGTVTRLQLHFRYAHQ*KPIPRT-LTLFINKHLARGWSRQG 591
           GY+ P+++ G    + GT+ RLQ  + +  Q + +P     +++NK L R   + G
Sbjct: 67  GYMFPVIEHGQPFKDDGTLYRLQRPYFWPSQAELVPDVEYAIYLNKRLLRNEQKHG 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,973,394
Number of Sequences: 27780
Number of extensions: 324224
Number of successful extensions: 688
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)